RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IL23AQ9NPF7 189 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
HDAC6-219ENST00000476625 MROH7Q68CQ1 1323 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
HDAC6-219ENST00000476625 DYNC1LI2O43237 492 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-219ENST00000476625 APPP05067 770 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 BMP3P12645 472 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 ALAS1P13196 640 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 TFF2Q03403 129 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 ZSCAN25Q6NSZ9 544 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-219ENST00000476625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC6-219ENST00000476625 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-219ENST00000476625 HERVK_113Q902F9 699 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 MKL1Q969V6 931 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 ASB2Q96Q27 587 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 THEGQ9P2T0 379 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
HDAC6-219ENST00000476625 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
HDAC6-219ENST00000476625 FOXP2O15409 715 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 TLR3O15455 904 aaKnown RBP14.27□□□□□ -0.13
HDAC6-219ENST00000476625 ARHGEF15O94989 841 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 TTLL1O95922 423 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 MCCP23508 829 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 TFAP4Q01664 338 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 CTDSPL2Q05D32 466 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-219ENST00000476625 ITGA7Q13683 1181 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
HDAC6-219ENST00000476625 KRT40Q6A162 431 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 TAPT1Q6NXT6 567 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 CHST13Q8NET6 341 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 NOC4LQ9BVI4 516 aaKnown RBP14.27□□□□□ -0.13
HDAC6-219ENST00000476625 ACAD9Q9H845 621 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 CERS4Q9HA82 394 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 SPC25Q9HBM1 224 aa14.27□□□□□ -0.13
HDAC6-219ENST00000476625 EPOPA6NHQ4 379 aa14.26□□□□□ -0.13
HDAC6-219ENST00000476625 FGBP02675 491 aa14.26□□□□□ -0.13
HDAC6-219ENST00000476625 CYP2C9P11712 490 aa14.26□□□□□ -0.13
HDAC6-219ENST00000476625 NEDD1Q8NHV4 660 aa14.26□□□□□ -0.13
HDAC6-219ENST00000476625 TRMT13Q9NUP7 481 aaKnown RBP14.26□□□□□ -0.13
HDAC6-219ENST00000476625 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 MYO9BQ13459 2157 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 ZBBXA8MT70 800 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 TSPY3P0CV98 308 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 TSPY8P0CW00 308 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 KCNQ1P51787 676 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 STAT2P52630 851 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 OAZ1P54368 228 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 NKX3-2P78367 333 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 TTLL4Q14679 1199 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 AKNAD1Q5T1N1 836 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 GIMAP6Q6P9H5 292 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 NSMFQ6X4W1 530 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 DEFB128Q7Z7B8 93 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 UHRF1Q96T88 793 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-219ENST00000476625 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 FBXO40Q9UH90 709 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 MSRAQ9UJ68 235 aa14.25□□□□□ -0.13
HDAC6-219ENST00000476625 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
HDAC6-219ENST00000476625 SLC16A2P36021 539 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 PPARAQ07869 468 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 RAB30Q15771 203 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 PPP2R2DQ66LE6 453 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 STAG1Q8WVM7 1258 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
HDAC6-219ENST00000476625 AP5M1Q9H0R1 490 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 SLC28A3Q9HAS3 691 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 CYP39A1Q9NYL5 469 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 PRR12Q9ULL5 1215 aa14.24□□□□□ -0.13
HDAC6-219ENST00000476625 NFIBO00712 420 aa14.23□□□□□ -0.13
HDAC6-219ENST00000476625 SLC1A4P43007 532 aa14.23□□□□□ -0.13
HDAC6-219ENST00000476625 FRMPD2Q68DX3 1309 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 TRIP12Q14669 1992 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 CA3P07451 260 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 MYL3P08590 195 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 MS4A1P11836 297 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 MRPS5P82675 430 aaKnown RBP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 KIAA1211Q6ZU35 1233 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 TMCO2Q7Z6W1 182 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 COPS5Q92905 334 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 ALDH8A1Q9H2A2 487 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 STX8Q9UNK0 236 aa14.22□□□□□ -0.13
HDAC6-219ENST00000476625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC6-219ENST00000476625 TET1Q8NFU7 2136 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 ASB14A6NK59 587 aa14.21□□□□□ -0.13
HDAC6-219ENST00000476625 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-219ENST00000476625 CCDC96Q2M329 555 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms