RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZSWIM5Q9P217 1185 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 ASTN1O14525 1302 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 MYH4Q9Y623 1939 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 MYADML2A6NDP7 307 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 B4E1Z4 1266 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 CST5P28325 142 aaPredicted RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 NKX3-2P78367 333 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 GPATCH4Q5T3I0 446 aaKnown RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 NSMFQ6X4W1 530 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 KRT23Q9C075 422 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 UPF3AQ9H1J1 476 aaKnown RBP12.67□□□□□ -0.38
SEC13-214ENST00000476597 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 PNMA2Q9UL42 364 aa12.67□□□□□ -0.38
SEC13-214ENST00000476597 ZNFX1Q9P2E3 1918 aaKnown RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 TRIM43BA6NCK2 446 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 NFIBO00712 420 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 CTAGE5O15320 804 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 CHMLP26374 656 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 TAPT1Q6NXT6 567 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 NUP133Q8WUM0 1156 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 TRIM43Q96BQ3 446 aaPredicted RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 UBA5Q9GZZ9 404 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 CNNM2Q9H8M5 875 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 PDLIM7Q9NR12 457 aa12.66□□□□□ -0.38
SEC13-214ENST00000476597 GNEQ9Y223 722 aaKnown RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 DDX49Q9Y6V7 483 aaKnown RBP12.66□□□□□ -0.38
SEC13-214ENST00000476597 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 RAD50Q92878 1312 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
SEC13-214ENST00000476597 ASGR1P07306 291 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 TNFAIP2Q03169 654 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
SEC13-214ENST00000476597 GNASQ5JWF2 1037 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 IQSEC1Q6DN90 963 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 BADQ92934 168 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 GLT1D1Q96MS3 346 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
SEC13-214ENST00000476597 STARD7Q9NQZ5 370 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
SEC13-214ENST00000476597 SMCHD1A6NHR9 2005 aa12.65□□□□□ -0.38
SEC13-214ENST00000476597 ELP1O95163 1332 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 TNKSO95271 1327 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 CLTBP09497 229 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 SMPD1P17405 629 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 ITGB8P26012 769 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 CDK7P50613 346 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 PTH1RQ03431 593 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 EEPD1Q7L9B9 569 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 MAF1Q9H063 256 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 VTA1Q9NP79 307 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 Q9Y3F1 56 aa12.64□□□□□ -0.39
SEC13-214ENST00000476597 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 SGSM2O43147 1006 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 DYNC1LI2O43237 492 aaPredicted RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 PQBP1O60828 265 aaKnown RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 CYP21A2P08686 494 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 CALML3P27482 149 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 RPS6P62753 249 aaKnown RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 BEX3Q00994 111 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 SEC23AQ15436 765 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 TMEM63BQ5T3F8 832 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
SEC13-214ENST00000476597 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
SEC13-214ENST00000476597 RBM47A0AV96 593 aaKnown RBP12.62□□□□□ -0.39
SEC13-214ENST00000476597 ARVCFO00192 962 aa12.62□□□□□ -0.39
SEC13-214ENST00000476597 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms