RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ANTXR2P58335 489 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 AGBL2Q5U5Z8 902 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 RAB11FIP4Q86YS3 637 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 B4GALNT2Q8NHY0 566 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 DBNDD2Q9BQY9 259 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 PAG1Q9NWQ8 432 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 CCDC9Q9Y3X0 531 aaKnown RBP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 A2ML1A8K2U0 1454 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 SMIM24O75264 130 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 PYGLP06737 847 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CDC25CP30307 473 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 MAGEA8P43361 318 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CDK17Q00537 523 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 TFCP2Q12800 502 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
HDAC1-206ENST00000476391 RALYLQ86SE5 291 aaKnown RBP15.29■□□□□ 0.04
HDAC1-206ENST00000476391 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-206ENST00000476391 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 IMPDH2P12268 514 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 NFXL1Q6ZNB6 911 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 SDCCAG8Q86SQ7 713 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-206ENST00000476391 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 EPAS1Q99814 870 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 OSBPL1AQ9BXW6 950 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 CAPN6Q9Y6Q1 641 aa15.29■□□□□ 0.04
HDAC1-206ENST00000476391 RASSF10A6NK89 507 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 LGALS16A8MUM7 142 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 TMOD1P28289 359 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 KIF5BP33176 963 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ABL2P42684 1182 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 AFMP43652 599 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 GUCY2FP51841 1108 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 PAK1Q13153 545 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 SPA17Q15506 151 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ARHGAP22Q7Z5H3 698 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ZNF513Q8N8E2 541 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 RETREG2Q8NC44 543 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 CHMP6Q96FZ7 201 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 AATFQ9NY61 560 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 LMCD1Q9NZU5 365 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 CNGA1P29973 690 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 SAFBQ15424 915 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ANKRD20A2Q5SQ80 823 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ANKRD20A1Q5TYW2 823 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 ANKRD20A3Q5VUR7 823 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 TBC1D1Q86TI0 1168 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 FAM81AQ8TBF8 368 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 CENPTQ96BT3 561 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
HDAC1-206ENST00000476391 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
HDAC1-206ENST00000476391 USP6P35125 1406 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 STK36Q9NRP7 1315 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 MYH13Q9UKX3 1938 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 LRRD1A4D1F6 860 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 RNF113AO15541 343 aaKnown RBP15.27■□□□□ 0.04
HDAC1-206ENST00000476391 RNF8O76064 485 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 NPTXRO95502 500 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 PDE6BP35913 854 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 ODF2Q5BJF6 829 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 ZNF507Q8TCN5 953 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 ANGEL1Q9UNK9 670 aaKnown RBP15.27■□□□□ 0.04
HDAC1-206ENST00000476391 NEO1Q92859 1461 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 MYH7P12883 1935 aa15.27■□□□□ 0.04
HDAC1-206ENST00000476391 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 H0YGN5 161 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 H7C1D1 291 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 ASAP2O43150 1006 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 MTA1Q13330 715 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 CCDC96Q2M329 555 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 EPHA10Q5JZY3 1008 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 USP49Q70CQ1 688 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 LRRC45Q96CN5 670 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.03
HDAC1-206ENST00000476391 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.03
HDAC1-206ENST00000476391 TBC1D2BQ9UPU7 963 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms