RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZKSCAN3Q9BRR0 538 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 KATNBL1Q9H079 304 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 UPF3AQ9H1J1 476 aaKnown RBP19■□□□□ 0.63
COL1A1-205ENST00000476387 SPC25Q9HBM1 224 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
COL1A1-205ENST00000476387 TRIM43BA6NCK2 446 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 ICAM1P05362 532 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 GJA9P57773 515 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 KCNA10Q16322 511 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 ANKRD33Q7Z3H0 272 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 DEFB123Q8N688 67 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 PCSK9Q8NBP7 692 aaKnown RBP18.99■□□□□ 0.63
COL1A1-205ENST00000476387 TRIM43Q96BQ3 446 aaPredicted RBP18.99■□□□□ 0.63
COL1A1-205ENST00000476387 TOX2Q96NM4 488 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 RANBP17Q9H2T7 1088 aaKnown RBP18.99■□□□□ 0.63
COL1A1-205ENST00000476387 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 MYH6P13533 1939 aa18.99■□□□□ 0.63
COL1A1-205ENST00000476387 SOWAHBA6NEL2 793 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 CLTBP09497 229 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 NKX3-2P78367 333 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 PTH1RQ03431 593 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 TRDNQ13061 729 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 BMP2KLQ5H9B9 411 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 SYDE2Q5VT97 1194 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 SH3RF1Q7Z6J0 888 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 UBAC1Q9BSL1 405 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 CYP39A1Q9NYL5 469 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 LAMA2P24043 3122 aaKnown RBP18.98■□□□□ 0.63
COL1A1-205ENST00000476387 ELP1O95163 1332 aa18.98■□□□□ 0.63
COL1A1-205ENST00000476387 KIAA0355O15063 1070 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 ADCY6O43306 1168 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 C6orf222P0C671 652 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-205ENST00000476387 SNAP25P60880 206 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 TTBK2Q6IQ55 1244 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 SKAP1Q86WV1 359 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 BADQ92934 168 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 ZSCAN10Q96SZ4 725 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-205ENST00000476387 KAT14Q9H8E8 782 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 TNKSO95271 1327 aa18.97■□□□□ 0.63
COL1A1-205ENST00000476387 FRMPD2Q68DX3 1309 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-205ENST00000476387 MYADML2A6NDP7 307 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 PQBP1O60828 265 aaKnown RBP18.96■□□□□ 0.63
COL1A1-205ENST00000476387 PDHBP11177 359 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 SLC16A2P36021 539 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 FAM109BQ6ICB4 259 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-205ENST00000476387 GLT1D1Q96MS3 346 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 COL6A3P12111 3177 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 ASTN1O14525 1302 aa18.96■□□□□ 0.63
COL1A1-205ENST00000476387 DCDC2CA8MYV0 355 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 ASGR1P07306 291 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 CYP21A2P08686 494 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 SNHG28P0DPA3 235 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 TNFAIP2Q03169 654 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 ZNF543Q08ER8 600 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 GNASQ5JWF2 1037 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 Q7L0L9 218 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 RALYLQ86SE5 291 aaKnown RBP18.95■□□□□ 0.62
COL1A1-205ENST00000476387 PNMA1Q8ND90 353 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 MORC4Q8TE76 937 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 MTMR10Q9NXD2 777 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 ZSWIM5Q9P217 1185 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 MROH7Q68CQ1 1323 aa18.95■□□□□ 0.62
COL1A1-205ENST00000476387 LOC102724159A0A0B4J2E5 919 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 PWP2Q15269 919 aaKnown RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 SHHQ15465 462 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 GPATCH4Q5T3I0 446 aaKnown RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 NSMFQ6X4W1 530 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 ENAHQ8N8S7 591 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 TMEM39AQ9NV64 488 aa18.94■□□□□ 0.62
COL1A1-205ENST00000476387 GNEQ9Y223 722 aaKnown RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 RBM8AQ9Y5S9 174 aaKnown RBP18.94■□□□□ 0.62
COL1A1-205ENST00000476387 A0A0U1RQG5 324 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-205ENST00000476387 CTAGE5O15320 804 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 RAG1P15918 1043 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 ITGB8P26012 769 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 CDK7P50613 346 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 C9orf50Q5SZB4 431 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 IFIT1BQ5T764 474 aaKnown RBP18.93■□□□□ 0.62
COL1A1-205ENST00000476387 IQSEC1Q6DN90 963 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 MAP4K1Q92918 833 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 VTA1Q9NP79 307 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 ADD3Q9UEY8 706 aaKnown RBP18.93■□□□□ 0.62
COL1A1-205ENST00000476387 Q9Y3F1 56 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 WDR19Q8NEZ3 1342 aa18.93■□□□□ 0.62
COL1A1-205ENST00000476387 LRRC37A2A6NM11 1700 aa18.92■□□□□ 0.62
COL1A1-205ENST00000476387 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-205ENST00000476387 IRX5P78411 483 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-205ENST00000476387 NOL8Q76FK4 1167 aaKnown RBP18.92■□□□□ 0.62
COL1A1-205ENST00000476387 TLK2Q86UE8 772 aa18.92■□□□□ 0.62
COL1A1-205ENST00000476387 NCOA7Q8NI08 942 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms