RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 NCAPH2Q6IBW4 605 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 TMTC1Q8IUR5 882 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 EPSTI1Q96J88 318 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 MED15Q96RN5 788 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 GREM2Q9H772 168 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.9
MACF1-216ENST00000476350 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 A0A087X0B3 334 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 TRIM66O15016 1216 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CA12O43570 354 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CALM1P0DP23 149 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CALM2P0DP24 149 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CALM3P0DP25 149 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 RPS12P25398 132 aaKnown RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 HUNKP57058 714 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 VSNL1P62760 191 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SPATA5Q8NB90 893 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 STRBPQ96SI9 672 aaKnown RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 BLZF1Q9H2G9 400 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 RSPH14Q9UHP6 348 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SLC4A4Q9Y6R1 1079 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SEMA3EO15041 775 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 GYPCP04921 128 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CSF1RP07333 972 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CUL4BQ13620 913 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 AKNAD1Q5T1N1 836 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 MCM9Q9NXL9 1143 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 RTL9Q8NET4 1388 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CHD4Q14839 1912 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 BACH1O14867 736 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CTSWP56202 376 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 ERVK-24P63145 666 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 BIRC2Q13490 618 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 TRIM14Q14142 442 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 MFSD14BQ5SR56 506 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 LUC7LQ9NQ29 371 aaKnown RBP9.45□□□□□ -0.9
MACF1-216ENST00000476350 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SPATA31A5Q5VU36 1347 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 SPATA31A7Q8IWB4 1347 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 TRIM75PA6NK02 468 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 PHKA1P46020 1223 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 CDKAL1Q5VV42 579 aa9.45□□□□□ -0.9
MACF1-216ENST00000476350 KBTBD13C9JR72 458 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 N4BP3O15049 544 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
MACF1-216ENST00000476350 ALX1Q15699 326 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 MCTP2Q6DN12 878 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 ARAP2Q8WZ64 1704 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 SLF1Q9BQI6 1058 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 MYO1AQ9UBC5 1043 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 PHACTR2O75167 634 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 MCM3P25205 808 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 KRT31Q15323 416 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 DPF3Q92784 378 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 COA1Q9GZY4 146 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 TAB2Q9NYJ8 693 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 PRDM1O75626 825 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 UBXN1Q04323 297 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 ZNF174Q15697 407 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 USP49Q70CQ1 688 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 NLRX1Q86UT6 975 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 SPATA20Q8TB22 786 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 AFAP1L1Q8TED9 768 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 NELFBQ8WX92 580 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 ZNF341Q9BYN7 854 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 VPS16Q9H269 839 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 GUCA1BQ9UMX6 200 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 KCNJ18B7U540 433 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 PRKAB2O43741 272 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 KCNJ12Q14500 433 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 FOXR1Q6PIV2 292 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 APTXQ7Z2E3 356 aaKnown RBP9.44□□□□□ -0.9
MACF1-216ENST00000476350 USP40Q9NVE5 1235 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 VPS54Q9P1Q0 977 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 RWDD2AQ9UIY3 292 aa9.44□□□□□ -0.9
MACF1-216ENST00000476350 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 TFRCP02786 760 aaKnown RBP9.43□□□□□ -0.9
MACF1-216ENST00000476350 FXR1P51114 621 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■□□ 18.9
MACF1-216ENST00000476350 COPB1P53618 953 aaKnown RBP9.43□□□□□ -0.9
MACF1-216ENST00000476350 CAGE1Q8TC20 777 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 PLEKHA4Q9H4M7 779 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
MACF1-216ENST00000476350 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 CETN2P41208 172 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 PAK1Q13153 545 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 TAF1CQ15572 869 aaPredicted RBP9.43□□□□□ -0.9
MACF1-216ENST00000476350 CCDC70Q6NSX1 233 aa9.43□□□□□ -0.9
MACF1-216ENST00000476350 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms