RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CYP2B6P20813 491 aa34.27■■■■□ 3.08
HOXB3-208ENST00000476342 DPP9Q86TI2 863 aa34.27■■■■□ 3.08
HOXB3-208ENST00000476342 CMTR1Q8N1G2 835 aaKnown RBP34.27■■■■□ 3.08
HOXB3-208ENST00000476342 APBA2Q99767 749 aa34.27■■■■□ 3.08
HOXB3-208ENST00000476342 SEC63Q9UGP8 760 aaKnown RBP34.27■■■■□ 3.08
HOXB3-208ENST00000476342 XRCC5P13010 732 aaKnown RBP34.26■■■■□ 3.07
HOXB3-208ENST00000476342 ANKRD35Q8N283 1001 aa34.26■■■■□ 3.07
HOXB3-208ENST00000476342 ABCB11O95342 1321 aa34.26■■■■□ 3.07
HOXB3-208ENST00000476342 HTTP42858 3142 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 PNMA6FA0A0J9YX94 578 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 CDC27P30260 824 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 CCDC82Q8N4S0 544 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 SLAIN1Q8ND83 568 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 DDX11Q96FC9 970 aa34.25■■■■□ 3.07
HOXB3-208ENST00000476342 LARP6Q9BRS8 491 aaKnown RBP34.25■■■■□ 3.07
HOXB3-208ENST00000476342 ADCY3O60266 1144 aa34.24■■■■□ 3.07
HOXB3-208ENST00000476342 TAL1P17542 331 aaPredicted RBP34.24■■■■□ 3.07
HOXB3-208ENST00000476342 MUM1L1Q5H9M0 696 aa34.24■■■■□ 3.07
HOXB3-208ENST00000476342 PXYLP1Q8TE99 480 aa34.24■■■■□ 3.07
HOXB3-208ENST00000476342 FAM217BQ9NTX9 383 aaPredicted RBP34.24■■■■□ 3.07
HOXB3-208ENST00000476342 HOXC6P09630 235 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 GRK4P32298 578 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 ADD1P35611 737 aaKnown RBP34.23■■■■□ 3.07
HOXB3-208ENST00000476342 RABEP1Q15276 862 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 SLC9C1Q4G0N8 1177 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 TRMT44Q8IYL2 757 aaKnown RBP34.23■■■■□ 3.07
HOXB3-208ENST00000476342 PIBF1Q8WXW3 757 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 PFASO15067 1338 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 CNTNAP5Q8WYK1 1306 aa34.23■■■■□ 3.07
HOXB3-208ENST00000476342 CCT2P78371 535 aaKnown RBP34.22■■■■□ 3.07
HOXB3-208ENST00000476342 TNS4Q8IZW8 715 aa34.22■■■■□ 3.07
HOXB3-208ENST00000476342 IL27Q8NEV9 243 aa34.22■■■■□ 3.07
HOXB3-208ENST00000476342 MRPL11Q9Y3B7 192 aaKnown RBP34.22■■■■□ 3.07
HOXB3-208ENST00000476342 PLXNA1Q9UIW2 1896 aa34.22■■■■□ 3.07
HOXB3-208ENST00000476342 A1CFQ9NQ94 594 aaKnown RBP34.21■■■■□ 3.07
HOXB3-208ENST00000476342 PCDHA1Q9Y5I3 950 aa34.21■■■■□ 3.07
HOXB3-208ENST00000476342 TPCN1Q9ULQ1 816 aa34.21■■■■□ 3.07
HOXB3-208ENST00000476342 RBBP6Q7Z6E9 1792 aaKnown RBP34.2■■■■□ 3.07
HOXB3-208ENST00000476342 NFIBO00712 420 aa34.2■■■■□ 3.06
HOXB3-208ENST00000476342 PPP1R11O60927 126 aaPredicted RBP34.2■■■■□ 3.06
HOXB3-208ENST00000476342 COBLO75128 1261 aa34.2■■■■□ 3.06
HOXB3-208ENST00000476342 PGK2P07205 417 aa34.2■■■■□ 3.06
HOXB3-208ENST00000476342 STK3Q13188 491 aa34.2■■■■□ 3.06
HOXB3-208ENST00000476342 NSMFQ6X4W1 530 aa34.2■■■■□ 3.06
HOXB3-208ENST00000476342 SLKQ9H2G2 1235 aaPredicted RBP34.2■■■■□ 3.06
HOXB3-208ENST00000476342 FUT2Q10981 343 aa34.19■■■■□ 3.06
HOXB3-208ENST00000476342 NOL8Q76FK4 1167 aaKnown RBP34.19■■■■□ 3.06
HOXB3-208ENST00000476342 CLEC4DQ8WXI8 215 aa34.19■■■■□ 3.06
HOXB3-208ENST00000476342 MAF1Q9H063 256 aa34.19■■■■□ 3.06
HOXB3-208ENST00000476342 DIS3Q9Y2L1 958 aaKnown RBP34.19■■■■□ 3.06
HOXB3-208ENST00000476342 ELNP15502 786 aa34.18■■■■□ 3.06
HOXB3-208ENST00000476342 NPLOC4Q8TAT6 608 aa34.18■■■■□ 3.06
HOXB3-208ENST00000476342 NCOA5Q9HCD5 579 aaKnown RBP34.18■■■■□ 3.06
HOXB3-208ENST00000476342 CYP39A1Q9NYL5 469 aa34.18■■■■□ 3.06
HOXB3-208ENST00000476342 DNAJC25-GNG10A0A024R161 153 aa34.17■■■■□ 3.06
HOXB3-208ENST00000476342 CPLX1O14810 134 aa34.17■■■■□ 3.06
HOXB3-208ENST00000476342 CPLX2Q6PUV4 134 aaKnown RBP34.17■■■■□ 3.06
HOXB3-208ENST00000476342 MCF2L2Q86YR7 1114 aa34.17■■■■□ 3.06
HOXB3-208ENST00000476342 SH3TC2Q8TF17 1288 aa34.17■■■■□ 3.06
HOXB3-208ENST00000476342 TRIB2Q92519 343 aa34.17■■■■□ 3.06
HOXB3-208ENST00000476342 RBM27Q9P2N5 1060 aaKnown RBP34.17■■■■□ 3.06
HOXB3-208ENST00000476342 BIN2Q9UBW5 565 aaPredicted RBP34.17■■■■□ 3.06
HOXB3-208ENST00000476342 CENPFP49454 3210 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 PTPDC1A2A3K4 754 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 POTEB2H3BUK9 544 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 ST18O60284 1047 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 HMGCRP04035 888 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 ZNF792Q3KQV3 632 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 RNF207Q6ZRF8 634 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 RGS22Q8NE09 1264 aa34.16■■■■□ 3.06
HOXB3-208ENST00000476342 PFKFB2O60825 505 aa34.15■■■■□ 3.06
HOXB3-208ENST00000476342 IFNAR1P17181 557 aa34.15■■■■□ 3.06
HOXB3-208ENST00000476342 CCL14Q16627 93 aa34.15■■■■□ 3.06
HOXB3-208ENST00000476342 MAML3Q96JK9 1138 aa34.15■■■■□ 3.06
HOXB3-208ENST00000476342 V9GY48 417 aaPredicted RBP34.15■■■■□ 3.06
HOXB3-208ENST00000476342 hCG_1642624A0A1W2PR95 340 aa34.14■■■■□ 3.06
HOXB3-208ENST00000476342 UBXN2AP68543 259 aa34.14■■■■□ 3.06
HOXB3-208ENST00000476342 BAATQ14032 418 aaPredicted RBP34.14■■■■□ 3.06
HOXB3-208ENST00000476342 NTRK3Q16288 839 aa34.14■■■■□ 3.06
HOXB3-208ENST00000476342 OLFML2BQ68BL8 750 aa34.14■■■■□ 3.06
HOXB3-208ENST00000476342 ARMC5Q96C12 935 aa34.14■■■■□ 3.06
HOXB3-208ENST00000476342 AKAP17AQ02040 695 aaKnown RBP34.13■■■■□ 3.05
HOXB3-208ENST00000476342 LIMCH1Q9UPQ0 1083 aa34.13■■■■□ 3.05
HOXB3-208ENST00000476342 hCG_1984214I3L0E3 225 aa34.13■■■■□ 3.05
HOXB3-208ENST00000476342 SCRN1Q12765 414 aa34.13■■■■□ 3.05
HOXB3-208ENST00000476342 ZNF713Q8N859 430 aaPredicted RBP34.13■■■■□ 3.05
HOXB3-208ENST00000476342 FAM133AQ8N9E0 248 aa34.13■■■■□ 3.05
HOXB3-208ENST00000476342 RNF26Q9BY78 433 aaPredicted RBP34.13■■■■□ 3.05
HOXB3-208ENST00000476342 INHAP05111 366 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 RPS6P62753 249 aaKnown RBP34.12■■■■□ 3.05
HOXB3-208ENST00000476342 ME3Q16798 604 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 MFSD14CQ5VZR4 134 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 TRIM22Q8IYM9 498 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 ABHD8Q96I13 439 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 FLRT1Q9NZU1 646 aa34.12■■■■□ 3.05
HOXB3-208ENST00000476342 PRPF3O43395 683 aaKnown RBP34.11■■■■□ 3.05
HOXB3-208ENST00000476342 CDKL5O76039 1030 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 CALML3P27482 149 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 SLC30A10Q6XR72 485 aa34.11■■■■□ 3.05
HOXB3-208ENST00000476342 HEATR3Q7Z4Q2 680 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms