RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 ADGRF4Q8IZF3 695 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 EEF2KMTQ96G04 330 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 ERO1AQ96HE7 468 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 SWAP70Q9UH65 585 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 MYH1P12882 1939 aa10.05□□□□□ -0.8
CCDC66-216ENST00000476142 CDK5RAP2Q96SN8 1893 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 TDP2O95551 362 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SMARCA1P28370 1054 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 ZNF543Q08ER8 600 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SYCP1Q15431 976 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 AK8Q96MA6 479 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-216ENST00000476142 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 EXOC1Q9NV70 894 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PSMA7O14818 248 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SLC37A4O43826 429 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 NOVP48745 357 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PMS1P54277 932 aaKnown RBP10.04□□□□□ -0.8
CCDC66-216ENST00000476142 UBXN1Q04323 297 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SPAG1Q07617 926 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PDE4DQ08499 809 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-216ENST00000476142 TRIM65Q6PJ69 517 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 ADSSL1Q8N142 457 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 CCDC47Q96A33 483 aaKnown RBP10.04□□□□□ -0.8
CCDC66-216ENST00000476142 CALML4Q96GE6 196 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PANX2Q96RD6 677 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 UIMC1Q96RL1 719 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 KBTBD4Q9NVX7 518 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 LIMA1Q9UHB6 759 aaKnown RBP10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PLIN4Q96Q06 1357 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 PHLPP2Q6ZVD8 1323 aa10.04□□□□□ -0.8
CCDC66-216ENST00000476142 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 KLRC4O43908 158 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 MARCH6O60337 910 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 MFAP3LO75121 409 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 TUBB4AP04350 444 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 GYPCP04921 128 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 KCNA4P22459 653 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CASQ1P31415 396 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 PBX1P40424 430 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 SRRTQ9BXP5 876 aaKnown RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 LZTFL1Q9NQ48 299 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 LRWD1Q9UFC0 647 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.86e-6■□□□□ 9.1
CCDC66-216ENST00000476142 PNMA6FA0A0J9YX94 578 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 H7C1D1 291 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CCDC175P0C221 793 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CBX1P83916 185 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 TMEM266Q2M3C6 531 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CNGA4Q8IV77 575 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 HPS3Q969F9 1004 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 L2HGDHQ9H9P8 463 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CGNQ9P2M7 1197 aaKnown RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 GOLGA6L9A6NEM1 432 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 FANCGO15287 622 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 ECE2O60344 883 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 PPP1R11O60927 126 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 SNHG28P0DPA3 235 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CHRNA5P30532 468 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 KCNB1Q14721 858 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 RAD9BQ6WBX8 426 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 MNS1Q8NEH6 495 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 WDR24Q96S15 920 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 CUEDC2Q9H467 287 aa10.03□□□□□ -0.8
CCDC66-216ENST00000476142 MRPL44Q9H9J2 332 aaKnown RBP10.03□□□□□ -0.8
CCDC66-216ENST00000476142 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 LTBP1Q14766 1721 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 POTEMA6NI47 508 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 H0YIN7 160 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 RHOBTB3O94955 611 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 MYL1P05976 194 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 FCER1AP12319 257 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
CCDC66-216ENST00000476142 ERCC6LQ2NKX8 1250 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 PODNQ7Z5L7 613 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.81
CCDC66-216ENST00000476142 CUL5Q93034 780 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 GJA10Q969M2 543 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 ANKRD31Q8N7Z5 1873 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
CCDC66-216ENST00000476142 AMPD3Q01432 767 aa10.02□□□□□ -0.81
CCDC66-216ENST00000476142 CERKLQ49MI3 558 aaPredicted RBP10.02□□□□□ -0.81
CCDC66-216ENST00000476142 DYMQ7RTS9 669 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms