RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TRIM47Q96LD4 638 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 TRERF1Q96PN7 1200 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 HOMER2Q9NSB8 354 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 STK36Q9NRP7 1315 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 ECM2O94769 699 aaPredicted RBP25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 PSMC4P43686 418 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 LBX1P52954 281 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 SSRP1Q08945 709 aaKnown RBP25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 TRAF1Q13077 416 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 PKN1Q16512 942 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 MUM1L1Q5H9M0 696 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 GPR142Q7Z601 462 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 TRIM22Q8IYM9 498 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 FBXO40Q9UH90 709 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 PCDHA1Q9Y5I3 950 aa25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 ZNFX1Q9P2E3 1918 aaKnown RBP25.63■■□□□ 1.69
MCF2L2-209ENST00000475664 TNPO2O14787 897 aaKnown RBP25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 AKAP17AQ02040 695 aaKnown RBP25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 PFKFB3Q16875 520 aaPredicted RBP25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 WDR78Q5VTH9 848 aa25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 PLEKHH3Q7Z736 793 aa25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 CLEC4DQ8WXI8 215 aa25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 COA7Q96BR5 231 aa25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 LLPHQ9BRT6 129 aaKnown RBP25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 ACAD9Q9H845 621 aa25.62■■□□□ 1.69
MCF2L2-209ENST00000475664 PTPDC1A2A3K4 754 aa25.61■■□□□ 1.69
MCF2L2-209ENST00000475664 DTNBO60941 627 aa25.61■■□□□ 1.69
MCF2L2-209ENST00000475664 SCG2P13521 617 aa25.61■■□□□ 1.69
MCF2L2-209ENST00000475664 WWC2Q6AWC2 1192 aa25.61■■□□□ 1.69
MCF2L2-209ENST00000475664 MRPL11Q9Y3B7 192 aaKnown RBP25.61■■□□□ 1.69
MCF2L2-209ENST00000475664 K7ELQ4 463 aaPredicted RBP25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 NFIBO00712 420 aa25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 JAK2O60674 1132 aa25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 DEXIO95424 95 aa25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 PTPREP23469 700 aa25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 HEATR3Q7Z4Q2 680 aa25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 GPKOWQ92917 476 aaPredicted RBP eCLIP25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 CWC22Q9HCG8 908 aaKnown RBP25.6■■□□□ 1.69
MCF2L2-209ENST00000475664 hCG_1984214I3L0E3 225 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 OPLAHO14841 1288 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 STRNO43815 780 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 GRB14Q14449 540 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 ABRAQ8N0Z2 381 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 ZNF713Q8N859 430 aaPredicted RBP25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 SMARCC2Q8TAQ2 1214 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 IVNS1ABPQ9Y6Y0 642 aa25.59■■□□□ 1.69
MCF2L2-209ENST00000475664 SLC15A5A6NIM6 579 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 STXBP3O00186 592 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 FCER1AP12319 257 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 FDPSP14324 419 aaKnown RBP25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 CUL4AQ13619 759 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 MORN1Q5T089 497 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 TYW1BQ6NUM6 668 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 HSCBQ8IWL3 235 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 MMP19Q99542 508 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 A1CFQ9NQ94 594 aaKnown RBP25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 BARHL2Q9NY43 387 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 ORC3Q9UBD5 711 aaPredicted RBP25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 LCTP09848 1927 aa25.58■■□□□ 1.69
MCF2L2-209ENST00000475664 PLXNA1Q9UIW2 1896 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 GNRH1P01148 92 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 KCTD2Q14681 263 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 ARHGEF6Q15052 776 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 PPP1R18Q6NYC8 613 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 GJD2Q9UKL4 321 aa25.57■■□□□ 1.68
MCF2L2-209ENST00000475664 GHRHRQ02643 423 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 RGS22Q8NE09 1264 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 SOCS4Q8WXH5 440 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 USP6NLQ92738 828 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 DDX11Q96FC9 970 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 AIFM3Q96NN9 605 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 MAF1Q9H063 256 aa25.56■■□□□ 1.68
MCF2L2-209ENST00000475664 ADORA2AP29274 412 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 NAPAP54920 295 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 NSMFQ6X4W1 530 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 OTOP1Q7RTM1 612 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 ANKRD35Q8N283 1001 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 SHISA4Q96DD7 197 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 SRRDQ9UH36 339 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 GABRQQ9UN88 632 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 PFASO15067 1338 aa25.55■■□□□ 1.68
MCF2L2-209ENST00000475664 DNAJC25-GNG10A0A024R161 153 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 HOXD10P28358 340 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 HMGN5P82970 282 aaKnown RBP25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 PRKCZQ05513 592 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 MCF2L2Q86YR7 1114 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 TBC1D5Q92609 795 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 NUDT12Q9BQG2 462 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 PRDM10Q9NQV6 1147 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 CYP39A1Q9NYL5 469 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 TRIM17Q9Y577 477 aa25.54■■□□□ 1.68
MCF2L2-209ENST00000475664 RPS6P62753 249 aaKnown RBP25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 MAP2K5Q13163 448 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 BAATQ14032 418 aaPredicted RBP25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 SLC30A10Q6XR72 485 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 RNF207Q6ZRF8 634 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 WASF1Q92558 559 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 SH3GLB2Q9NR46 395 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 VPS54Q9P1Q0 977 aa25.53■■□□□ 1.68
MCF2L2-209ENST00000475664 ESYT2A0FGR8 921 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms