RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NECAB1Q8N987 351 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 CCDC12Q8WUD4 166 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 ZKSCAN3Q9BRR0 538 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 GLT8D2Q9H1C3 349 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 SH3GLB2Q9NR46 395 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 ORC3Q9UBD5 711 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 CFAP45Q9UL16 551 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 AGTPBP1Q9UPW5 1226 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 PLIN4Q96Q06 1357 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 PLA2G6O60733 806 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 FDX1P10109 184 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 CAP2P40123 477 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 USP14P54578 494 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 FAM110CQ1W6H9 321 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 TPRNQ4KMQ1 711 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 MCTP2Q6DN12 878 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 ZFPM1Q8IX07 1006 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 C7orf61Q8IZ16 206 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 STK11IPQ8N1F8 1099 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 ANKRD13CQ8N6S4 541 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 NSUN7Q8NE18 718 aaKnown RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 GMCL1P1Q8NEA9 526 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 CEP95Q96GE4 821 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 C8orf76Q96K31 380 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 TMEM47Q9BQJ4 181 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 AS3MTQ9HBK9 375 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-207ENST00000475558 CLIP2Q9UDT6 1046 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 STXBP5LQ9Y2K9 1186 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
SHQ1-207ENST00000475558 LAMA3Q16787 3333 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 DOCK2Q92608 1830 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 TRIM75PA6NK02 468 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 HMGCRP04035 888 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 SNHG28P0DPA3 235 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 CALML3P27482 149 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 GRM4Q14833 912 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 NTRK3Q16288 839 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 BRAPQ7Z569 592 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 DIS3LQ8TF46 1054 aaKnown RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 ZNF396Q96N95 335 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 SPZ1Q9BXG8 430 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 MAF1Q9H063 256 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-207ENST00000475558 PTPRFP10586 1907 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
SHQ1-207ENST00000475558 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 C19orf81C9J6K1 198 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 KLRF2D3W0D1 207 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 PPP1R37O75864 691 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 CTDNEP1O95476 244 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 AKR1B1P15121 316 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 GNA11P29992 359 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 ICA1Q05084 483 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 TMTC3Q6ZXV5 915 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 TDHQ8IZJ6 230 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 BICD2Q8TD16 824 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 LPAR1Q92633 364 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 TNPO1Q92973 898 aaKnown RBP8.08□□□□□ -1.12
SHQ1-207ENST00000475558 RRP36Q96EU6 259 aaKnown RBP8.08□□□□□ -1.12
SHQ1-207ENST00000475558 GMCL1Q96IK5 515 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 ALG1Q9BT22 464 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 SLC26A6Q9BXS9 759 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 C11orf49Q9H6J7 331 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 FAM217BQ9NTX9 383 aaPredicted RBP8.08□□□□□ -1.12
SHQ1-207ENST00000475558 MTMR10Q9NXD2 777 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 SEC63Q9UGP8 760 aaKnown RBP8.08□□□□□ -1.12
SHQ1-207ENST00000475558 GJD2Q9UKL4 321 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 TMX2Q9Y320 296 aa8.08□□□□□ -1.12
SHQ1-207ENST00000475558 V9GY48 417 aaPredicted RBP8.08□□□□□ -1.12
SHQ1-207ENST00000475558 DOCK1Q14185 1865 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 F5H6K3 240 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 TK2O00142 265 aa8.07□□□□□ -1.12
SHQ1-207ENST00000475558 LARGE1O95461 756 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms