RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 METTL16Q86W50 562 aaKnown RBP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 PURBQ96QR8 312 aaKnown RBP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 CMA1P23946 247 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 ZNF543Q08ER8 600 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 DHX40Q8IX18 779 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 BMP2KQ9NSY1 1161 aaPredicted RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 SMCHD1A6NHR9 2005 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 CHMP2AO43633 222 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 PTGER2P43116 358 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 IQCB1Q15051 598 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 SH2D3AQ9BRG2 576 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 GNAQP50148 359 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 KANSL2Q9H9L4 492 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
KCNIP3-206ENST00000475491 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 STAT3P40763 770 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 SP4Q02446 784 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 SLC37A4O43826 429 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 HMGB2P26583 209 aaKnown RBP12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 SPP2Q13103 211 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 PLS1Q14651 629 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 DYMQ7RTS9 669 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 V9GYY5 206 aaPredicted RBP12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 CTAGE5O15320 804 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 PTPREP23469 700 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 FANCLQ9NW38 375 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 TBC1D7Q9P0N9 293 aa12.91□□□□□ -0.34
KCNIP3-206ENST00000475491 USP27XA6NNY8 438 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 CUTAO60888 179 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 UBA7P41226 1012 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 ADCY7P51828 1080 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 GPR162Q16538 588 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
KCNIP3-206ENST00000475491 MYH1P12882 1939 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 SKILP12757 684 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 RESP18Q5W5W9 173 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 DPF2Q92785 391 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 PSMD1Q99460 953 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 SPON1Q9HCB6 807 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 SWAP70Q9UH65 585 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 ZBTB21Q9ULJ3 1066 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.35
KCNIP3-206ENST00000475491 MEIS1O00470 390 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 ZNF500O60304 480 aaPredicted RBP12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 BMP3P12645 472 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 IDEP14735 1019 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 TGFB2P61812 414 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 CYP4A11Q02928 519 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 NONOQ15233 471 aaKnown RBP eCLIP12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 PRR16Q569H4 304 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 DTHD1Q6ZMT9 781 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 CALML3P27482 149 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 ZNF76P36508 570 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 CUL4BQ13620 913 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 AGBL1Q96MI9 1066 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 GMLQ99445 158 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 MTMR2Q13614 643 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 POSTNQ15063 836 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
KCNIP3-206ENST00000475491 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 ADM5C9JUS6 153 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 H7C1D1 291 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 STAT6P42226 847 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
KCNIP3-206ENST00000475491 ALAS1P13196 640 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms