RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TSHZ3Q63HK5 1081 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 FAM133AQ8N9E0 248 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 AGBL1Q96MI9 1066 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 ASTN1O14525 1302 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 M0R2C6 588 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 DYNC1LI2O43237 492 aaPredicted RBP24.33■■□□□ 1.49
VPS36-203ENST00000475375 ALAS1P13196 640 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 MRPS5P82675 430 aaKnown RBP24.33■■□□□ 1.49
VPS36-203ENST00000475375 PDE4BQ07343 736 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 ADAMTS19Q8TE59 1207 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 CHURC1Q8WUH1 139 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 TRERF1Q96PN7 1200 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 NACAP1Q9BZK3 213 aa24.33■■□□□ 1.49
VPS36-203ENST00000475375 UMODL1Q5DID0 1318 aa24.33■■□□□ 1.48
VPS36-203ENST00000475375 SOWAHBA6NEL2 793 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 SLC3A2P08195 630 aaKnown RBP24.32■■□□□ 1.48
VPS36-203ENST00000475375 SLC1A4P43007 532 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 NKX3-2P78367 333 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 FAM160B2Q86V87 743 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 MIER1Q8N108 512 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 NEDD1Q8NHV4 660 aa24.32■■□□□ 1.48
VPS36-203ENST00000475375 GNEQ9Y223 722 aaKnown RBP24.32■■□□□ 1.48
VPS36-203ENST00000475375 DDX49Q9Y6V7 483 aaKnown RBP24.32■■□□□ 1.48
VPS36-203ENST00000475375 PATL2C9JE40 543 aaKnown RBP24.31■■□□□ 1.48
VPS36-203ENST00000475375 PTGS1P23219 599 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 TFAP4Q01664 338 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 TKFCQ3LXA3 575 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 EEPD1Q7L9B9 569 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 IFNL3Q8IZI9 196 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 SLC43A3Q8NBI5 491 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 TRPV6Q9H1D0 765 aa24.31■■□□□ 1.48
VPS36-203ENST00000475375 YBX2Q9Y2T7 364 aaKnown RBP24.31■■□□□ 1.48
VPS36-203ENST00000475375 ZBBXA8MT70 800 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 SMPD1P17405 629 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 MCCP23508 829 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 SNAP25P60880 206 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 PSMC6P62333 389 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 LRRFIP1Q32MZ4 808 aaKnown RBP24.3■■□□□ 1.48
VPS36-203ENST00000475375 FBXO16Q8IX29 292 aaPredicted RBP24.3■■□□□ 1.48
VPS36-203ENST00000475375 MICALL1Q8N3F8 863 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 STAG1Q8WVM7 1258 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 GMCL1Q96IK5 515 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 NOC4LQ9BVI4 516 aaKnown RBP24.3■■□□□ 1.48
VPS36-203ENST00000475375 PDGFCQ9NRA1 345 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 SLC4A7Q9Y6M7 1214 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 CHD7Q9P2D1 2997 aa24.3■■□□□ 1.48
VPS36-203ENST00000475375 PLIN4Q96Q06 1357 aa24.29■■□□□ 1.48
VPS36-203ENST00000475375 RABGGTBP53611 331 aa24.29■■□□□ 1.48
VPS36-203ENST00000475375 KCTD1Q719H9 257 aa24.29■■□□□ 1.48
VPS36-203ENST00000475375 RPUSD2Q8IZ73 545 aaKnown RBP24.29■■□□□ 1.48
VPS36-203ENST00000475375 UHRF1Q96T88 793 aaPredicted RBP24.29■■□□□ 1.48
VPS36-203ENST00000475375 NAPBQ9H115 298 aa24.29■■□□□ 1.48
VPS36-203ENST00000475375 TSPYL2Q9H2G4 693 aaPredicted RBP24.29■■□□□ 1.48
VPS36-203ENST00000475375 ZNF536O15090 1300 aa24.29■■□□□ 1.48
VPS36-203ENST00000475375 B4GALT4O60513 344 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 PPP2R2DQ66LE6 453 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 IQSEC1Q6DN90 963 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 NSMFQ6X4W1 530 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 SEZ6LQ9BYH1 1024 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 STX8Q9UNK0 236 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 MTMR7Q9Y216 660 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 GRIN2DO15399 1336 aa24.28■■□□□ 1.48
VPS36-203ENST00000475375 PPARAQ07869 468 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 MUM1L1Q5H9M0 696 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 PPP4R3BQ5MIZ7 849 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 SCLYQ96I15 445 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 WNT8AQ9H1J5 351 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 CYP39A1Q9NYL5 469 aa24.27■■□□□ 1.48
VPS36-203ENST00000475375 KIAA1211Q6ZU35 1233 aa24.26■■□□□ 1.47
VPS36-203ENST00000475375 SEC62Q99442 399 aaKnown RBP24.26■■□□□ 1.47
VPS36-203ENST00000475375 CCPG1Q9ULG6 757 aa24.26■■□□□ 1.47
VPS36-203ENST00000475375 TSPY2A6NKD2 308 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 MYOGP15173 224 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 TAPT1Q6NXT6 567 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 VTA1Q9NP79 307 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 RAPGEFL1Q9UHV5 662 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 RCAN3Q9UKA8 241 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 PRR12Q9ULL5 1215 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 Q9Y3F1 56 aa24.25■■□□□ 1.47
VPS36-203ENST00000475375 ATP2A2P16615 1042 aaKnown RBP24.24■■□□□ 1.47
VPS36-203ENST00000475375 SKIV2LQ15477 1246 aaKnown RBP24.24■■□□□ 1.47
VPS36-203ENST00000475375 CCDC96Q2M329 555 aa24.24■■□□□ 1.47
VPS36-203ENST00000475375 TMEM63BQ5T3F8 832 aa24.24■■□□□ 1.47
VPS36-203ENST00000475375 C20orf194Q5TEA3 1177 aa24.24■■□□□ 1.47
VPS36-203ENST00000475375 RCSD1Q6JBY9 416 aa24.24■■□□□ 1.47
VPS36-203ENST00000475375 ALDH8A1Q9H2A2 487 aaPredicted RBP24.24■■□□□ 1.47
VPS36-203ENST00000475375 PCDHA11Q9Y5I1 949 aa24.24■■□□□ 1.47
VPS36-203ENST00000475375 PLA2G6O60733 806 aa24.23■■□□□ 1.47
VPS36-203ENST00000475375 PURBQ96QR8 312 aaKnown RBP24.23■■□□□ 1.47
VPS36-203ENST00000475375 FSD1Q9BTV5 496 aa24.23■■□□□ 1.47
VPS36-203ENST00000475375 GBF1Q92538 1859 aa24.23■■□□□ 1.47
VPS36-203ENST00000475375 LRRC37A2A6NM11 1700 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 NMT2O60551 498 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 SUPT20HL2P0C7V6 817 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 CYP2C9P11712 490 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 RASGRP2Q7LDG7 609 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 DEFB128Q7Z7B8 93 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 DCTPP1Q9H773 170 aa24.22■■□□□ 1.47
VPS36-203ENST00000475375 TRMT13Q9NUP7 481 aaKnown RBP24.22■■□□□ 1.47
VPS36-203ENST00000475375 NCOR1O75376 2440 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms