RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KCNJ6P48051 423 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 UBASH3AP57075 661 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 KLRC3Q07444 240 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 TNIP1Q15025 636 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 SPATA1Q5VX52 437 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 MOXD1Q6UVY6 613 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 IGSF22Q8N9C0 903 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 RASSF8Q8NHQ8 419 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 BIN2Q9UBW5 565 aaPredicted RBP24.57■■□□□ 1.52
CCM2-206ENST00000474617 JAKMIP3Q5VZ66 844 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 CLEC10AQ8IUN9 316 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 COA7Q96BR5 231 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 CTAGE1Q96RT6 745 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 GINM1Q9NU53 330 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 NFE2L3Q9Y4A8 694 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 RAD17O75943 681 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 TNNI2P48788 182 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 CALCRLQ16602 461 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 ZNF658Q5TYW1 1059 aaPredicted RBP24.56■■□□□ 1.52
CCM2-206ENST00000474617 KCTD1Q719H9 257 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 GRAMD1CQ8IYS0 662 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 JDP2Q8WYK2 163 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 CALML4Q96GE6 196 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 MTMR9Q96QG7 549 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 AMNQ9BXJ7 453 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 LRRC27Q9C0I9 530 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 PDGFDQ9GZP0 370 aaPredicted RBP24.56■■□□□ 1.52
CCM2-206ENST00000474617 TAOK3Q9H2K8 898 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 GOPCQ9HD26 462 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 KCND1Q9NSA2 647 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 KBTBD4Q9NVX7 518 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 FANCLQ9NW38 375 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 STK17AQ9UEE5 414 aa24.56■■□□□ 1.52
CCM2-206ENST00000474617 USP17L10C9JJH3 530 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 FOSP01100 380 aaPredicted RBP24.55■■□□□ 1.52
CCM2-206ENST00000474617 BMP3P12645 472 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 USP11P51784 963 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 TTBK2Q6IQ55 1244 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 CABP7Q86V35 215 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 CCDC112Q8NEF3 446 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 LTBP3Q9NS15 1303 aa24.55■■□□□ 1.52
CCM2-206ENST00000474617 PLA2G6O60733 806 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 GH2P01242 217 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 SPAG1Q07617 926 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 CUL4BQ13620 913 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 CDC37Q16543 378 aaPredicted RBP24.54■■□□□ 1.52
CCM2-206ENST00000474617 QRICH1Q2TAL8 776 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 CIAPIN1Q6FI81 312 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 ZBED3Q96IU2 234 aaPredicted RBP24.54■■□□□ 1.52
CCM2-206ENST00000474617 NRBP1Q9UHY1 535 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 ATF5Q9Y2D1 282 aaPredicted RBP24.54■■□□□ 1.52
CCM2-206ENST00000474617 SYNRGQ9UMZ2 1314 aa24.54■■□□□ 1.52
CCM2-206ENST00000474617 NDUFB10O96000 172 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 RPN1P04843 607 aaKnown RBP24.53■■□□□ 1.52
CCM2-206ENST00000474617 CDK11BP21127 795 aaKnown RBP24.53■■□□□ 1.52
CCM2-206ENST00000474617 MAP3K10Q02779 954 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 STIM1Q13586 685 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 CCDC144BQ3MJ40 725 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 SYDE2Q5VT97 1194 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 CACTINQ8WUQ7 758 aaKnown RBP24.53■■□□□ 1.52
CCM2-206ENST00000474617 RWDD2AQ9UIY3 292 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 PCDHA1Q9Y5I3 950 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 STK24Q9Y6E0 443 aa24.53■■□□□ 1.52
CCM2-206ENST00000474617 PPP1R11O60927 126 aaPredicted RBP24.52■■□□□ 1.52
CCM2-206ENST00000474617 SFPQP23246 707 aaKnown RBP eCLIP24.52■■□□□ 1.52
CCM2-206ENST00000474617 TNFAIP1Q13829 316 aa24.52■■□□□ 1.52
CCM2-206ENST00000474617 KARSQ15046 597 aaKnown RBP24.52■■□□□ 1.52
CCM2-206ENST00000474617 TMX2Q9Y320 296 aa24.52■■□□□ 1.52
CCM2-206ENST00000474617 CD2APQ9Y5K6 639 aa24.52■■□□□ 1.52
CCM2-206ENST00000474617 FER1L6Q2WGJ9 1857 aa24.52■■□□□ 1.52
CCM2-206ENST00000474617 CNTNAP1P78357 1384 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 FILIP1Q7Z7B0 1213 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 VSTM4Q8IW00 320 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 PYCARDQ9ULZ3 195 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 CYP3A7-CYP3A51PA0A087WV96 503 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 FAM196BA6NMK8 535 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 PPP1R3GB7ZBB8 358 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 TCP10L2B9ZVM9 353 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 GDF11O95390 407 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 CYP3A7P24462 503 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 SLC16A2P36021 539 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 FMR1Q06787 632 aaKnown RBP eCLIP24.51■■□□□ 1.51
CCM2-206ENST00000474617 NAALADL2Q58DX5 795 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 TMC6Q7Z403 805 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 FBXO11Q86XK2 927 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 ANKRD20A12PQ8NF67 263 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 PRIMPOLQ96LW4 560 aa24.51■■□□□ 1.51
CCM2-206ENST00000474617 COL4A5P29400 1685 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 BRCA1P38398 1863 aaKnown RBP24.5■■□□□ 1.51
CCM2-206ENST00000474617 RHOBTB3O94955 611 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 TPM2P07951 284 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 ATP1A3P13637 1013 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 CXCL9Q07325 125 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 C7orf25Q9BPX7 421 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 TMEM260Q9NX78 707 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 LRWD1Q9UFC0 647 aa24.5■■□□□ 1.51
CCM2-206ENST00000474617 CCP110O43303 1012 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 ZNF280AP59817 542 aaPredicted RBP24.49■■□□□ 1.51
CCM2-206ENST00000474617 PAK1Q13153 545 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms