RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 PLXNB2O15031 1838 aa21■□□□□ 0.95
SNRPB-203ENST00000474384 PFKFB2O60825 505 aa21■□□□□ 0.95
SNRPB-203ENST00000474384 GRB14Q14449 540 aa21■□□□□ 0.95
SNRPB-203ENST00000474384 KCTD2Q14681 263 aa21■□□□□ 0.95
SNRPB-203ENST00000474384 ME3Q16798 604 aa21■□□□□ 0.95
SNRPB-203ENST00000474384 SEC63Q9UGP8 760 aaKnown RBP21■□□□□ 0.95
SNRPB-203ENST00000474384 LARGE1O95461 756 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 CYP2B6P20813 491 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 ADORA2AP29274 412 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 PRMT2P55345 433 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 SCRN1Q12765 414 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 NTRK3Q16288 839 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 COL13A1Q5TAT6 717 aaPredicted RBP20.99■□□□□ 0.95
SNRPB-203ENST00000474384 ABRAQ8N0Z2 381 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 ANKRD35Q8N283 1001 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 NECAB1Q8N987 351 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 SOCS4Q8WXH5 440 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 USP6NLQ92738 828 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 PCDHA1Q9Y5I3 950 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 PTCH2Q9Y6C5 1203 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 V9GY48 417 aaPredicted RBP20.99■□□□□ 0.95
SNRPB-203ENST00000474384 ABCB11O95342 1321 aa20.99■□□□□ 0.95
SNRPB-203ENST00000474384 NFIBO00712 420 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 ST18O60284 1047 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 PPFIA3O75145 1194 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 MAP2K5Q13163 448 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
SNRPB-203ENST00000474384 RAET1EQ8TD07 263 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 CLEC4DQ8WXI8 215 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 PHKBQ93100 1093 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 LIMCH1Q9UPQ0 1083 aa20.98■□□□□ 0.95
SNRPB-203ENST00000474384 ZNFX1Q9P2E3 1918 aaKnown RBP20.98■□□□□ 0.95
SNRPB-203ENST00000474384 CPLX1O14810 134 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 COBLO75128 1261 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 PGK2P07205 417 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 RGS2P41220 211 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 NSMFQ6X4W1 530 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.97■□□□□ 0.951e-6■■□□□ 12.2
SNRPB-203ENST00000474384 DPP9Q86TI2 863 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 DDX11Q96FC9 970 aa20.97■□□□□ 0.95
SNRPB-203ENST00000474384 A1CFQ9NQ94 594 aaKnown RBP20.97■□□□□ 0.95
SNRPB-203ENST00000474384 MRPL11Q9Y3B7 192 aaKnown RBP20.97■□□□□ 0.95
SNRPB-203ENST00000474384 HTTP42858 3142 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 IFNAR1P17181 557 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 TRAF1Q13077 416 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 IRF5Q13568 498 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 FBXO46Q6PJ61 603 aaPredicted RBP20.96■□□□□ 0.95
SNRPB-203ENST00000474384 SLC26A6Q9BXS9 759 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 MCOLN1Q9GZU1 580 aa20.96■□□□□ 0.95
SNRPB-203ENST00000474384 PRPF3O43395 683 aaKnown RBP20.95■□□□□ 0.94
SNRPB-203ENST00000474384 CD2BP2O95400 341 aaKnown RBP20.95■□□□□ 0.94
SNRPB-203ENST00000474384 CPLX2Q6PUV4 134 aaKnown RBP20.95■□□□□ 0.94
SNRPB-203ENST00000474384 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
SNRPB-203ENST00000474384 NPLOC4Q8TAT6 608 aa20.95■□□□□ 0.94
SNRPB-203ENST00000474384 TBC1D5Q92609 795 aa20.95■□□□□ 0.94
SNRPB-203ENST00000474384 GTF3C6Q969F1 213 aa20.95■□□□□ 0.94
SNRPB-203ENST00000474384 PTPDC1A2A3K4 754 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 ADCY3O60266 1144 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 DTNBO60941 627 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 HOXC6P09630 235 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 ELNP15502 786 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 AKAP17AQ02040 695 aaKnown RBP20.94■□□□□ 0.94
SNRPB-203ENST00000474384 BAATQ14032 418 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-203ENST00000474384 RNF207Q6ZRF8 634 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 HEATR3Q7Z4Q2 680 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 GPKOWQ92917 476 aaPredicted RBP eCLIP20.94■□□□□ 0.94
SNRPB-203ENST00000474384 ZSCAN31Q96LW9 406 aaPredicted RBP20.94■□□□□ 0.94
SNRPB-203ENST00000474384 APBA2Q99767 749 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 CYP39A1Q9NYL5 469 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 PFASO15067 1338 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 ZNF236Q9UL36 1845 aa20.94■□□□□ 0.94
SNRPB-203ENST00000474384 DNAJC25-GNG10A0A024R161 153 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 OPLAHO14841 1288 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 XRCC5P13010 732 aaKnown RBP20.93■□□□□ 0.94
SNRPB-203ENST00000474384 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
SNRPB-203ENST00000474384 CCL14Q16627 93 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 ZNF792Q3KQV3 632 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 MCF2L2Q86YR7 1114 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 RGS22Q8NE09 1264 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 RNF26Q9BY78 433 aaPredicted RBP20.93■□□□□ 0.94
SNRPB-203ENST00000474384 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
SNRPB-203ENST00000474384 POTEB2H3BUK9 544 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 CDKL5O76039 1030 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 CTDNEP1O95476 244 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 CALML3P27482 149 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 GRK4P32298 578 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 RPS6P62753 249 aaKnown RBP20.92■□□□□ 0.94
SNRPB-203ENST00000474384 CNTN2Q02246 1040 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 ST3GAL1Q11201 340 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 PKN1Q16512 942 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
SNRPB-203ENST00000474384 WWC2Q6AWC2 1192 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 SLC30A10Q6XR72 485 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 TRIM22Q8IYM9 498 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 PURBQ96QR8 312 aaKnown RBP20.92■□□□□ 0.94
SNRPB-203ENST00000474384 FLRT1Q9NZU1 646 aa20.92■□□□□ 0.94
SNRPB-203ENST00000474384 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
SNRPB-203ENST00000474384 CFBP00751 764 aa20.91■□□□□ 0.94
SNRPB-203ENST00000474384 SCG2P13521 617 aa20.91■□□□□ 0.94
SNRPB-203ENST00000474384 CCDC83Q8IWF9 413 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms