RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.91
ECHDC1-214ENST00000474289 SOS2Q07890 1332 aaPredicted RBP20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 FAM107AO95990 144 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 MDH1P40925 334 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 CARSP49589 748 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 IL17AQ16552 155 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 PIK3R5Q8WYR1 880 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 TRIM47Q96LD4 638 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 CCDC42Q96M95 316 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 NUP58Q9BVL2 599 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 IFIH1Q9BYX4 1025 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 GGA2Q9UJY4 613 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 NFU1Q9UMS0 254 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 SPATA31A3Q5VYP0 1347 aa20.7■□□□□ 0.9
ECHDC1-214ENST00000474289 MBD4O95243 580 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 RCAN1P53805 252 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 RETREG2Q8NC44 543 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 TUBGCP2Q9BSJ2 902 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 MAGEC2Q9UBF1 373 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 USO1O60763 962 aaKnown RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 GLI1P08151 1106 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 IBSPP21815 317 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 CDR1P51861 262 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 PYM1Q9BRP8 204 aaKnown RBP20.69■□□□□ 0.9
ECHDC1-214ENST00000474289 ESYT3A0FGR9 886 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 ZSCAN5CA6NGD5 496 aaPredicted RBP20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 E7EVH7 732 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 CDK17Q00537 523 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 DRP2Q13474 957 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 TMTC2Q8N394 836 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 GSG1L2A8MUP6 293 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 NCK2O43639 380 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 TBC1D8BQ0IIM8 1120 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 CD302Q8IX05 232 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 ATP6V1G3Q96LB4 118 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 GDF3Q9NR23 364 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 PCDHA13Q9Y5I0 950 aa20.68■□□□□ 0.9
ECHDC1-214ENST00000474289 PDHBP11177 359 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 PAFAH1B1P43034 410 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 ITGB3BPQ13352 177 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 NPY5RQ15761 445 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 CEP57Q86XR8 500 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 IFT20Q8IY31 132 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 ISCA1Q9BUE6 129 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 DDX20Q9UHI6 824 aaKnown RBP20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 COL18A1P39060 1754 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 PRKAB2O43741 272 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 PHKA1P46020 1223 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 SNCBQ16143 134 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 GLE1Q53GS7 698 aaKnown RBP20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 TTI2Q6NXR4 508 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 CYB5D1Q6P9G0 228 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 FAM228AQ86W67 206 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 CYFIP2Q96F07 1278 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 CCDC114Q96M63 670 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 PCMTD1Q96MG8 357 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 C1orf167Q5SNV9 1468 aa20.67■□□□□ 0.9
ECHDC1-214ENST00000474289 GCFC2P16383 781 aaKnown RBP20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 SATB1Q01826 763 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 FUT2Q10981 343 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 SPRED3Q2MJR0 410 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 PARP9Q8IXQ6 854 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 MREGQ8N565 214 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 IFT81Q8WYA0 676 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 ALS2CR12Q96Q35 445 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 TMCO5BA8MYB1 307 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 GUCY2FP51841 1108 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 PAK2Q13177 524 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 TYW1BQ6NUM6 668 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 CCDC121Q6ZUS5 278 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 FUKQ8N0W3 1084 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 MS4A14Q96JA4 679 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 PPANQ9NQ55 473 aaKnown RBP20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 ARHGAP20Q9P2F6 1191 aa20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 V9GY48 417 aaPredicted RBP20.66■□□□□ 0.9
ECHDC1-214ENST00000474289 PSMA7O14818 248 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 HEXIM1O94992 359 aaKnown RBP20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 MCM7P33993 719 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 STAT6P42226 847 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 LDHAL6AQ6ZMR3 332 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 MAGEB6Q8N7X4 407 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 FAXDC2Q96IV6 333 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 UBAC1Q9BSL1 405 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 TLR10Q9BXR5 811 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 ACTR5Q9H9F9 607 aaPredicted RBP20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 SRRM3A6NNA2 597 aaPredicted RBP20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 HMGB1P1B2RPK0 211 aaPredicted RBP20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 KIF11P52732 1056 aa20.65■□□□□ 0.9
ECHDC1-214ENST00000474289 GUCY2DQ02846 1103 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms