RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RAD50Q92878 1312 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 NHSQ6T4R5 1651 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TUBGCP6Q96RT7 1819 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 ARFGEF1Q9Y6D6 1849 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 ESYT3A0FGR9 886 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CCDC66A2RUB6 948 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 KLRG2A4D1S0 409 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 IMPDH2P12268 514 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 NEK3P51956 506 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TRAF1Q13077 416 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 MOGSQ13724 837 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CCDC122Q5T0U0 273 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TMC4Q7Z404 712 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TBATAQ96M53 351 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 SMYD2Q9NRG4 433 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 DKK3Q9UBP4 350 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CTNNA3Q9UI47 895 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 SUFUQ9UMX1 484 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TTLL3Q9Y4R7 772 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 NR2E3Q9Y5X4 410 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 LINC00854A0A1B0GVQ3 168 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 FAM221BA6H8Z2 402 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 MYO1BO43795 1136 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 AGR2O95994 175 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 DPEP1P16444 411 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CNGA1P29973 690 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 RXRGP48443 463 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 PURAQ00577 322 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 APBA1Q02410 837 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 PICALMQ13492 652 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 PKN1Q16512 942 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TKFCQ3LXA3 575 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 BTN2A1Q7KYR7 527 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 LILRB2Q8N423 598 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 DRAXINQ8NBI3 349 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 KCT2Q8NC54 265 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 WNT2BQ93097 391 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 FAM126AQ9BYI3 521 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 NACA2Q9H009 215 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 TCF7L2Q9NQB0 619 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 PCDHGB7Q9Y5F8 929 aa6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 MORC2Q9Y6X9 1032 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-208ENST00000474246 CACNA1BQ00975 2339 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 TMCC2O75069 709 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 COBLO75128 1261 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 AP1G2O75843 785 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 CDKL5O76039 1030 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 BAG2O95816 211 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 PMLP29590 882 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 SOX11P35716 441 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 RENBPP51606 427 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 CSE1LP55060 971 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 CLDN10P78369 228 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 MRPS35P82673 323 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 KIF4BQ2VIQ3 1234 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 C10orf76Q5T2E6 689 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 ABRAXAS1Q6UWZ7 409 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 SRLQ86TD4 932 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 JAKMIP2Q96AA8 810 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 DHRS1Q96LJ7 313 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM7Q9C029 511 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 ETAA1Q9NY74 926 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 TTC21AQ8NDW8 1320 aa6.9□□□□□ -1.3
SMARCE1-208ENST00000474246 KNDC1Q76NI1 1749 aa6.9□□□□□ -1.31
SMARCE1-208ENST00000474246 SOWAHBA6NEL2 793 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 SPTLC2O15270 562 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 RASGRP1O95267 797 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 SFTPCP11686 197 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 KRT10P13645 584 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 GJA5P36382 358 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TUSC1Q2TAM9 212 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 KMT5BQ4FZB7 885 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 GALNT17Q6IS24 598 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 C1orf216Q8TAB5 229 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 DEPDC7Q96QD5 511 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 AFG3L2Q9Y4W6 797 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 COL6A3P12111 3177 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 CRB1P82279 1406 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 CLTCL1P53675 1640 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 AKAP10O43572 662 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 NEMFO60524 1076 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 GPR37L1O60883 481 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TYRP1P17643 537 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 DESP17661 470 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 INPP5BP32019 993 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms