RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CWF19L1Q69YN2 538 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 POMZP3Q6PJE2 187 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 ANKS3Q6ZW76 656 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 UBXN4Q92575 508 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 HAUS7Q99871 368 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 DSCC1Q9BVC3 393 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 HDAC8Q9BY41 377 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 CHST7Q9NS84 486 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 SF3B6Q9Y3B4 125 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 SSU72P8A0A1W2PR75 194 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 OR14I1A6ND48 311 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 FAM86C2PA6NEL3 165 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 OVOL3O00110 214 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 CD247P20963 164 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 SRSF3P84103 164 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 LARP1BQ659C4 914 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 HHIPL2Q6UWX4 724 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 EEPD1Q7L9B9 569 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 SIRT2Q8IXJ6 389 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 DHX38Q92620 1227 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 ZNF669Q96BR6 464 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 SHISA4Q96DD7 197 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 GPR20Q99678 358 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 PRDM14Q9GZV8 571 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 LTBP3Q9NS15 1303 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 MYRFQ9Y2G1 1151 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 DIS3Q9Y2L1 958 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 PCDHA11Q9Y5I1 949 aa5.1□□□□□ -1.59
ECHDC1-213ENST00000474240 C9IYK1 514 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 AGRPO00253 132 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 PRAMEF1O95521 474 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 BMP8BP34820 402 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 GTF2F1P35269 517 aaKnown RBP eCLIP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 NOP2P46087 812 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 RBL2Q08999 1139 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 DUSP4Q13115 394 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 RAB33AQ14088 237 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 RTP5Q14D33 572 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 DDR2Q16832 855 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 TDRD10Q5VZ19 366 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 KIAA1211LQ6NV74 962 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 LRP10Q7Z4F1 713 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 FAM178BQ8IXR5 827 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 LINC00116Q8NCU8 138 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 RCC1LQ96I51 464 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 ZNF512BQ96KM6 892 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 GP6Q9HCN6 339 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 LUC7LQ9NQ29 371 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 SIRT5Q9NXA8 310 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 SIRPGQ9P1W8 387 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 EBF1Q9UH73 591 aa5.09□□□□□ -1.59
ECHDC1-213ENST00000474240 IQCA1LA6NCM1 817 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 SHOXO15266 292 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 KLF4O43474 513 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 LRRN2O75325 713 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 DDAH1O94760 285 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 TP53P04637 393 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 POU4F1Q01851 419 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 GRB10Q13322 594 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 FRMD5Q7Z6J6 570 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 ST13P5Q8NFI4 369 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 KLHL6Q8WZ60 621 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 TCTN2Q96GX1 697 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 APBA2Q99767 749 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 KLHL25Q9H0H3 589 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 CNTD2Q9H8S5 307 aa5.08□□□□□ -1.6
ECHDC1-213ENST00000474240 NOP56O00567 594 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 N4BP3O15049 544 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 CBFA2T2O43439 604 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 PRICKLE3O43900 615 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 EFEMP2O95967 443 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 EPHX1P07099 455 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 ZXDAP98168 799 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 CHRNEQ04844 493 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 SNX17Q15036 470 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 DCAF15Q66K64 600 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 CNKSR3Q6P9H4 555 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 C6orf15Q6UXA7 325 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 TMC3Q7Z5M5 1100 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 ADAT2Q7Z6V5 191 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 HNRNPLLQ8WVV9 542 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 MKL1Q969V6 931 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 GFOD1Q9NXC2 390 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
ECHDC1-213ENST00000474240 SHISA3A0PJX4 238 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 IRS4O14654 1257 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 TNFRSF1AP19438 455 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 VIPR1P32241 457 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 ZNF445P59923 1031 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 CYP2R1Q6VVX0 501 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 TMEFF1Q8IYR6 380 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 FIBCD1Q8N539 461 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 ANKS4BQ8N8V4 417 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 TCFL5Q9UL49 500 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 PALD1Q9ULE6 856 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 ZNF451Q9Y4E5 1061 aa5.06□□□□□ -1.6
ECHDC1-213ENST00000474240 TRBV23OR9-2A0A075B6M9 112 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms