RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CCDC136Q96JN2 1154 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 IL25Q9H293 177 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 PHF24Q9UPV7 400 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 IFIT3O14879 490 aaKnown RBP23.89■■□□□ 1.41
SNX13-206ENST00000474067 BMP8BP34820 402 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 SNAP25P60880 206 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 CNTN2Q02246 1040 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 PTH1RQ03431 593 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 WTAPQ15007 396 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 MUM1L1Q5H9M0 696 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 RNF20Q5VTR2 975 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 SLC39A5Q6ZMH5 540 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 RASGRP2Q7LDG7 609 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 RGS22Q8NE09 1264 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 LBHD1Q9BQE6 289 aaPredicted RBP23.89■■□□□ 1.41
SNX13-206ENST00000474067 VTA1Q9NP79 307 aa23.89■■□□□ 1.41
SNX13-206ENST00000474067 ALPK3Q96L96 1907 aa23.88■■□□□ 1.41
SNX13-206ENST00000474067 E7EWF7 191 aa23.88■■□□□ 1.41
SNX13-206ENST00000474067 TAL1P17542 331 aaPredicted RBP23.88■■□□□ 1.41
SNX13-206ENST00000474067 CST5P28325 142 aaPredicted RBP23.88■■□□□ 1.41
SNX13-206ENST00000474067 ATN1P54259 1190 aaPredicted RBP23.88■■□□□ 1.41
SNX13-206ENST00000474067 CCDC144BQ3MJ40 725 aa23.88■■□□□ 1.41
SNX13-206ENST00000474067 TMTC2Q8N394 836 aa23.88■■□□□ 1.41
SNX13-206ENST00000474067 DNERQ8NFT8 737 aa23.88■■□□□ 1.41
SNX13-206ENST00000474067 ZMYND8Q9ULU4 1186 aaPredicted RBP23.88■■□□□ 1.41
SNX13-206ENST00000474067 RBM8AQ9Y5S9 174 aaKnown RBP23.88■■□□□ 1.41
SNX13-206ENST00000474067 ZEB2O60315 1214 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 PGK1P00558 417 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 GOLGA8HP0CJ92 632 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 ADCYAP1R1P41586 468 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 RTP1P59025 263 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 BAATQ14032 418 aaPredicted RBP23.87■■□□□ 1.41
SNX13-206ENST00000474067 CDC37Q16543 378 aaPredicted RBP23.87■■□□□ 1.41
SNX13-206ENST00000474067 IQSEC1Q6DN90 963 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 NOL8Q76FK4 1167 aaKnown RBP23.87■■□□□ 1.41
SNX13-206ENST00000474067 CATIPQ7Z7H3 387 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 GLT1D1Q96MS3 346 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
SNX13-206ENST00000474067 RBM27Q9P2N5 1060 aaKnown RBP23.87■■□□□ 1.41
SNX13-206ENST00000474067 MRPL11Q9Y3B7 192 aaKnown RBP23.87■■□□□ 1.41
SNX13-206ENST00000474067 MROH7Q68CQ1 1323 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 SYNRGQ9UMZ2 1314 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 SOWAHBA6NEL2 793 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 ADAMTS4O75173 837 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 C6orf222P0C671 652 aaPredicted RBP23.86■■□□□ 1.41
SNX13-206ENST00000474067 TNFAIP2Q03169 654 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 SNX17Q15036 470 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 SEC23AQ15436 765 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 FGD4Q96M96 766 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 SEZ6LQ9BYH1 1024 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 UBA5Q9GZZ9 404 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 AP5M1Q9H0R1 490 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 STARD7Q9NQZ5 370 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 ATP11BQ9Y2G3 1177 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 Q9Y3F1 56 aa23.86■■□□□ 1.41
SNX13-206ENST00000474067 ALDH5A1P51649 535 aaPredicted RBP23.85■■□□□ 1.41
SNX13-206ENST00000474067 GJA9P57773 515 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 FBXO11Q86XK2 927 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 SAMD3Q8N6K7 520 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 MORC4Q8TE76 937 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 GDF15Q99988 308 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 AMNQ9BXJ7 453 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 ANO2Q9NQ90 1003 aa23.85■■□□□ 1.41
SNX13-206ENST00000474067 MAP3K20Q9NYL2 800 aaKnown RBP23.85■■□□□ 1.41
SNX13-206ENST00000474067 KLRF2D3W0D1 207 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 NFIBO00712 420 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 CABYRO75952 493 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 CALML3P27482 149 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 ACLYP53396 1101 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 USH1GQ495M9 461 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 TMEM67Q5HYA8 995 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 CYB5R4Q7L1T6 521 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 UPF3AQ9H1J1 476 aaKnown RBP23.84■■□□□ 1.41
SNX13-206ENST00000474067 PRO3102Q9H379 93 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 SMCHD1A6NHR9 2005 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 ELP1O95163 1332 aa23.84■■□□□ 1.41
SNX13-206ENST00000474067 A0A1W2PQ45 241 aaPredicted RBP23.83■■□□□ 1.41
SNX13-206ENST00000474067 A0A1W2PQY0 241 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 SYN1P17600 705 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 KIF5BP33176 963 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 MCM5P33992 734 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 RPS6P62753 249 aaKnown RBP23.83■■□□□ 1.41
SNX13-206ENST00000474067 PDE4DQ08499 809 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
SNX13-206ENST00000474067 GNASQ5JWF2 1037 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 KLHDC9Q8NEP7 349 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 FERMT2Q96AC1 680 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 TMEM87BQ96K49 555 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 MAP3K14Q99558 947 aa23.83■■□□□ 1.41
SNX13-206ENST00000474067 CDC45O75419 566 aa23.82■■□□□ 1.4
SNX13-206ENST00000474067 NKX3-2P78367 333 aa23.82■■□□□ 1.4
SNX13-206ENST00000474067 CTCFLQ8NI51 663 aaPredicted RBP23.82■■□□□ 1.4
SNX13-206ENST00000474067 CLEC4DQ8WXI8 215 aa23.82■■□□□ 1.4
SNX13-206ENST00000474067 UBE2OQ9C0C9 1292 aaKnown RBP23.82■■□□□ 1.4
SNX13-206ENST00000474067 KATNBL1Q9H079 304 aa23.82■■□□□ 1.4
SNX13-206ENST00000474067 DCDC2CA8MYV0 355 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 NKRFO15226 690 aaKnown RBP eCLIP23.81■■□□□ 1.4
SNX13-206ENST00000474067 CALM1P0DP23 149 aa23.81■■□□□ 1.4
SNX13-206ENST00000474067 CALM2P0DP24 149 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms