RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TRMT13Q9NUP7 481 aaKnown RBP12.74□□□□□ -0.37
SSBP1-209ENST00000473783 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 FBXO40Q9UH90 709 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 DCHS1Q96JQ0 3298 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 IER5LQ5T953 404 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
SSBP1-209ENST00000473783 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
SSBP1-209ENST00000473783 IRF2BPLQ9H1B7 796 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 Q9Y3F1 56 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 PLXNA3P51805 1871 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
SSBP1-209ENST00000473783 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 DYNC1LI2O43237 492 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 AKR1B1P15121 316 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 WDR5P61964 334 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 EVX2Q03828 476 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 EDAQ92838 391 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 PABPC5Q96DU9 382 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 RAD9AQ99638 391 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
SSBP1-209ENST00000473783 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
SSBP1-209ENST00000473783 GJB5O95377 273 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 GNAI3P08754 354 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 EEF2P13639 858 aaKnown RBP12.71□□□□□ -0.37
SSBP1-209ENST00000473783 SMPD1P17405 629 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 COL19A1Q14993 1142 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 PTPROQ16827 1216 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
SSBP1-209ENST00000473783 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
SSBP1-209ENST00000473783 KANSL2Q9H9L4 492 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 MUTYHQ9UIF7 546 aa12.71□□□□□ -0.37
SSBP1-209ENST00000473783 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 ASB14A6NK59 587 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 BFSP2Q13515 415 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 IQSEC1Q6DN90 963 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 PRPF38AQ8NAV1 312 aaKnown RBP12.7□□□□□ -0.38
SSBP1-209ENST00000473783 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 PBXIP1Q96AQ6 731 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 MICAL3Q7RTP6 2002 aa12.7□□□□□ -0.38
SSBP1-209ENST00000473783 GREB1LQ9C091 1923 aaPredicted RBP12.7□□□□□ -0.38
SSBP1-209ENST00000473783 TMEM221A6NGB7 291 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 M0R296 226 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 RAD21O60216 631 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 ZBED4O75132 1171 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 DEFB103AP81534 67 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 PURAQ00577 322 aaKnown RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 SMAD2Q15796 467 aaKnown RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 TRIM67Q6ZTA4 783 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 TMCO2Q7Z6W1 182 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 DCP1AQ9NPI6 582 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-209ENST00000473783 NLRC5Q86WI3 1866 aa12.69□□□□□ -0.38
SSBP1-209ENST00000473783 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 MYO15AQ9UKN7 3530 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 PROB1E7EW31 1015 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 CYP2D6P10635 497 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 PTGS1P23219 599 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 OAZ1P54368 228 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 FBXL6Q8N531 539 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 CRBNQ96SW2 442 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
SSBP1-209ENST00000473783 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
SSBP1-209ENST00000473783 ALG13Q9NP73 1137 aaKnown RBP12.68□□□□□ -0.38
SSBP1-209ENST00000473783 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
SSBP1-209ENST00000473783 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
SSBP1-209ENST00000473783 USP17L21D6R901 530 aa12.67□□□□□ -0.38
SSBP1-209ENST00000473783 NCK2O43639 380 aa12.67□□□□□ -0.38
SSBP1-209ENST00000473783 EFCAB14O75071 495 aa12.67□□□□□ -0.38
SSBP1-209ENST00000473783 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
SSBP1-209ENST00000473783 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms