RNA–Protein interactions for RNA: ENST00000473086.3

ATP1A3-205, Transcript of ATPase Na+/K+ transporting subunit alpha 3, human

TSL 5

Gene ATP1A3, Length 889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP1A3-205	ENST00000473086		A0A1W2PQ45	241 aa	Predicted RBP	18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086		A0A1W2PQY0	241 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	ZNF213	O14771	459 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	TKFC	Q3LXA3	575 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	RNF180	Q86T96	592 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	MAFA	Q8NHW3	353 aa	Predicted RBP	18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PRKAG2	Q9UGJ0	569 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	FAM184B	Q9ULE4	1060 aa		18.92	■□□□□ 0.62
ATP1A3-205	ENST00000473086	HIP1	O00291	1037 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	KDM4A	O75164	1064 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	ICAM1	P05362	532 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PC	P11498	1178 aa	Known RBP	18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PTGS1	P23219	599 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	ZNF543	Q08ER8	600 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	CCDC144B	Q3MJ40	725 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	SH3RF1	Q7Z6J0	888 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	ESR2	Q92731	530 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	DSCC1	Q9BVC3	393 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	RNF41	Q9H4P4	317 aa	Predicted RBP	18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PDLIM7	Q9NR12	457 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	CYP39A1	Q9NYL5	469 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	MYH6	P13533	1939 aa		18.91	■□□□□ 0.62
ATP1A3-205	ENST00000473086	PRUNE2	Q8WUY3	3088 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086		B4E1Z4	1266 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	SNHG28	P0DPA3	235 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	NSMF	Q6X4W1	530 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	KLHDC9	Q8NEP7	349 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	CPVL	Q9H3G5	476 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	SEMA6B	Q9H3T3	888 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	ABHD16B	Q9H3Z7	469 aa		18.9	■□□□□ 0.62
ATP1A3-205	ENST00000473086	TRIM43B	A6NCK2	446 aa		18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	NFIB	O00712	420 aa		18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	DUSP11	O75319	330 aa	Known RBP	18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	GOLGA8H	P0CJ92	632 aa		18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TLE2	Q04725	743 aa		18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TTC14	Q96N46	770 aa		18.89	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ACLY	P53396	1101 aa		18.88	■□□□□ 0.61
ATP1A3-205	ENST00000473086	KCNA10	Q16322	511 aa		18.88	■□□□□ 0.61
ATP1A3-205	ENST00000473086	C1orf53	Q5VUE5	145 aa		18.88	■□□□□ 0.61
ATP1A3-205	ENST00000473086	SYMPK	Q92797	1274 aa	Known RBP	18.88	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CTAGE5	O15320	804 aa		18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	PQBP1	O60828	265 aa	Known RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	C6orf222	P0C671	652 aa	Predicted RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ITGB8	P26012	769 aa		18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	IMMT	Q16891	758 aa	Known RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TMEM63B	Q5T3F8	832 aa		18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	SLC30A10	Q6XR72	485 aa		18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	FBXO16	Q8IX29	292 aa	Predicted RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ENAH	Q8N8S7	591 aa	Predicted RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CLEC4D	Q8WXI8	215 aa		18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	UPF3A	Q9H1J1	476 aa	Known RBP	18.87	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CST5	P28325	142 aa	Predicted RBP	18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	BAAT	Q14032	418 aa	Predicted RBP	18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	SHH	Q15465	462 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	EEPD1	Q7L9B9	569 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	DGKH	Q86XP1	1220 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	PNMA1	Q8ND90	353 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	MYLIP	Q8WY64	445 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	BAD	Q92934	168 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TSEN34	Q9BSV6	310 aa	Known RBP	18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	UBA5	Q9GZZ9	404 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	STARD7	Q9NQZ5	370 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	PDGFC	Q9NRA1	345 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ZSWIM5	Q9P217	1185 aa		18.86	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TNKS	O95271	1327 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ASB14	A6NK59	587 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CHML	P26374	656 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	GJA9	P57773	515 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	SMAD3	P84022	425 aa	Known RBP	18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	BEX3	Q00994	111 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	PTH1R	Q03431	593 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	IQCA1	Q86XH1	822 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TTYH1	Q9H313	450 aa	Predicted RBP	18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CTNNA3	Q9UI47	895 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TAF6L	Q9Y6J9	622 aa		18.85	■□□□□ 0.61
ATP1A3-205	ENST00000473086	RAD50	Q92878	1312 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	PTPDC1	A2A3K4	754 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	MOXD2P	A6NHM9	499 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ASGR1	P07306	291 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CLTB	P09497	229 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	FOSL2	P15408	326 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	SMPD1	P17405	629 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TNFAIP2	Q03169	654 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	C9orf50	Q5SZB4	431 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	TAPT1	Q6NXT6	567 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	ANKS1A	Q92625	1134 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	KAT14	Q9H8E8	782 aa		18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	GNE	Q9Y223	722 aa	Known RBP	18.84	■□□□□ 0.61
ATP1A3-205	ENST00000473086	WDR19	Q8NEZ3	1342 aa		18.83	■□□□□ 0.61
ATP1A3-205	ENST00000473086	CALML3	P27482	149 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	ALDH5A1	P51649	535 aa	Predicted RBP	18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	USH1G	Q495M9	461 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	GNAS	Q5JWF2	1037 aa		18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	GPATCH4	Q5T3I0	446 aa	Known RBP	18.83	■□□□□ 0.6
ATP1A3-205	ENST00000473086	NOL8	Q76FK4	1167 aa	Known RBP	18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms