RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PIGSQ96S52 555 aa24.11■■□□□ 1.45
TOP3A-204ENST00000472959 ABCB11O95342 1321 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 COBLO75128 1261 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 PDIA3P30101 505 aaKnown RBP24.1■■□□□ 1.45
TOP3A-204ENST00000472959 NEK4P51957 841 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 ARMC5Q96C12 935 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 MAF1Q9H063 256 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 DIS3Q9Y2L1 958 aaKnown RBP24.1■■□□□ 1.45
TOP3A-204ENST00000472959 NID2Q14112 1375 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 PFASO15067 1338 aa24.1■■□□□ 1.45
TOP3A-204ENST00000472959 USH1GQ495M9 461 aa24.09■■□□□ 1.45
TOP3A-204ENST00000472959 MUM1L1Q5H9M0 696 aa24.09■■□□□ 1.45
TOP3A-204ENST00000472959 HOMER1Q86YM7 354 aa24.09■■□□□ 1.45
TOP3A-204ENST00000472959 FAM217BQ9NTX9 383 aaPredicted RBP24.09■■□□□ 1.45
TOP3A-204ENST00000472959 SEC63Q9UGP8 760 aaKnown RBP24.09■■□□□ 1.45
TOP3A-204ENST00000472959 MRPL11Q9Y3B7 192 aaKnown RBP24.09■■□□□ 1.45
TOP3A-204ENST00000472959 DNAJC25-GNG10A0A024R161 153 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 ELNP15502 786 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 CMTR1Q8N1G2 835 aaKnown RBP24.08■■□□□ 1.45
TOP3A-204ENST00000472959 RGS22Q8NE09 1264 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 CLEC4DQ8WXI8 215 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 ABHD8Q96I13 439 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 KIF2CQ99661 725 aa24.08■■□□□ 1.45
TOP3A-204ENST00000472959 A1CFQ9NQ94 594 aaKnown RBP24.08■■□□□ 1.45
TOP3A-204ENST00000472959 DOCK3Q8IZD9 2030 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 HMGCRP04035 888 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 PGK2P07205 417 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 CDC27P30260 824 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 AK2P54819 239 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 ZNF792Q3KQV3 632 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 OLFML2BQ68BL8 750 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 IL27Q8NEV9 243 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 NPLOC4Q8TAT6 608 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 SH3TC2Q8TF17 1288 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 BIN2Q9UBW5 565 aaPredicted RBP24.07■■□□□ 1.44
TOP3A-204ENST00000472959 PCDHA1Q9Y5I3 950 aa24.07■■□□□ 1.44
TOP3A-204ENST00000472959 NFIBO00712 420 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 PPP1R11O60927 126 aaPredicted RBP24.06■■□□□ 1.44
TOP3A-204ENST00000472959 TAL1P17542 331 aaPredicted RBP24.06■■□□□ 1.44
TOP3A-204ENST00000472959 ADD1P35611 737 aaKnown RBP24.06■■□□□ 1.44
TOP3A-204ENST00000472959 UBXN2AP68543 259 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 FUT2Q10981 343 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 NSMFQ6X4W1 530 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 MCF2L2Q86YR7 1114 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 CCDC82Q8N4S0 544 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 TRIB2Q92519 343 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 TBC1D32Q96NH3 1257 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 CYP39A1Q9NYL5 469 aa24.06■■□□□ 1.44
TOP3A-204ENST00000472959 ZNF236Q9UL36 1845 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 POTEB2H3BUK9 544 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 CCL14Q16627 93 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 MFSD14CQ5VZR4 134 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 PIBF1Q8WXW3 757 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 MAML3Q96JK9 1138 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 ZNF333Q96JL9 665 aa24.05■■□□□ 1.44
TOP3A-204ENST00000472959 LARP6Q9BRS8 491 aaKnown RBP24.05■■□□□ 1.44
TOP3A-204ENST00000472959 INHAP05111 366 aa24.04■■□□□ 1.44
TOP3A-204ENST00000472959 RABEP1Q15276 862 aa24.04■■□□□ 1.44
TOP3A-204ENST00000472959 ZNF467Q7Z7K2 595 aaPredicted RBP24.04■■□□□ 1.44
TOP3A-204ENST00000472959 MSL3Q8N5Y2 521 aaKnown RBP24.04■■□□□ 1.44
TOP3A-204ENST00000472959 FAM133AQ8N9E0 248 aa24.04■■□□□ 1.44
TOP3A-204ENST00000472959 TPCN1Q9ULQ1 816 aa24.04■■□□□ 1.44
TOP3A-204ENST00000472959 CNTNAP5Q8WYK1 1306 aa24.04■■□□□ 1.44
TOP3A-204ENST00000472959 PLXNB2O15031 1838 aa24.03■■□□□ 1.44
TOP3A-204ENST00000472959 IGHA2P01877 340 aa24.03■■□□□ 1.44
TOP3A-204ENST00000472959 CCT2P78371 535 aaKnown RBP24.03■■□□□ 1.44
TOP3A-204ENST00000472959 BAATQ14032 418 aaPredicted RBP24.03■■□□□ 1.44
TOP3A-204ENST00000472959 RNF207Q6ZRF8 634 aa24.03■■□□□ 1.44
TOP3A-204ENST00000472959 FLRT1Q9NZU1 646 aa24.03■■□□□ 1.44
TOP3A-204ENST00000472959 RBM27Q9P2N5 1060 aaKnown RBP24.03■■□□□ 1.44
TOP3A-204ENST00000472959 V9GY48 417 aaPredicted RBP24.03■■□□□ 1.44
TOP3A-204ENST00000472959 PTPDC1A2A3K4 754 aa24.02■■□□□ 1.44
TOP3A-204ENST00000472959 SAMD3Q8N6K7 520 aa24.02■■□□□ 1.44
TOP3A-204ENST00000472959 SLKQ9H2G2 1235 aaPredicted RBP24.02■■□□□ 1.44
TOP3A-204ENST00000472959 MAP3K20Q9NYL2 800 aaKnown RBP24.02■■□□□ 1.44
TOP3A-204ENST00000472959 PFKFB2O60825 505 aa24.01■■□□□ 1.43
TOP3A-204ENST00000472959 IFNAR1P17181 557 aa24.01■■□□□ 1.43
TOP3A-204ENST00000472959 RPS6P62753 249 aaKnown RBP24.01■■□□□ 1.43
TOP3A-204ENST00000472959 NTRK3Q16288 839 aa24.01■■□□□ 1.43
TOP3A-204ENST00000472959 MAP3K21Q5TCX8 1036 aa24.01■■□□□ 1.43
TOP3A-204ENST00000472959 CPLX2Q6PUV4 134 aaKnown RBP24.01■■□□□ 1.43
TOP3A-204ENST00000472959 TINF2Q9BSI4 451 aa24.01■■□□□ 1.43
TOP3A-204ENST00000472959 NCOA5Q9HCD5 579 aaKnown RBP24.01■■□□□ 1.43
TOP3A-204ENST00000472959 CPLX1O14810 134 aa24■■□□□ 1.43
TOP3A-204ENST00000472959 CNTN2Q02246 1040 aa24■■□□□ 1.43
TOP3A-204ENST00000472959 GHRHRQ02643 423 aa24■■□□□ 1.43
TOP3A-204ENST00000472959 STK3Q13188 491 aa24■■□□□ 1.43
TOP3A-204ENST00000472959 MAMDC4Q6UXC1 1216 aa24■■□□□ 1.43
TOP3A-204ENST00000472959 ADD3Q9UEY8 706 aaKnown RBP24■■□□□ 1.43
TOP3A-204ENST00000472959 HTTP42858 3142 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 hCG_1642624A0A1W2PR95 340 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 hCG_1984214I3L0E3 225 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 PRPF3O43395 683 aaKnown RBP23.99■■□□□ 1.43
TOP3A-204ENST00000472959 PRKAR2AP13861 404 aaKnown RBP23.99■■□□□ 1.43
TOP3A-204ENST00000472959 CALML3P27482 149 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 AKAP17AQ02040 695 aaKnown RBP23.99■■□□□ 1.43
TOP3A-204ENST00000472959 ZNF713Q8N859 430 aaPredicted RBP23.99■■□□□ 1.43
TOP3A-204ENST00000472959 FGD4Q96M96 766 aa23.99■■□□□ 1.43
TOP3A-204ENST00000472959 RNF26Q9BY78 433 aaPredicted RBP23.99■■□□□ 1.43
TOP3A-204ENST00000472959 NRBP1Q9UHY1 535 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms