RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ERVV-1B6SEH8 477 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 CA12O43570 354 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 F13BP05160 661 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 LDHBP07195 334 aaKnown RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 SPINK2P20155 84 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 PRKAR2BP31323 418 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 GP2P55259 537 aaKnown RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 EIF6P56537 245 aaKnown RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 POU4F3Q15319 338 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 NFKBIBQ15653 356 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 ALG1LQ6GMV1 187 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 SEZ6L2Q6UXD5 910 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 SUPT20HQ8NEM7 779 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 EZH1Q92800 747 aaPredicted RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 SYNGAP1Q96PV0 1343 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 PASKQ96RG2 1323 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 GZF1Q9H116 711 aaPredicted RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 TAF1DQ9H5J8 278 aaPredicted RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 CCDC86Q9H6F5 360 aaKnown RBP4.59□□□□□ -1.67
XRN1-209ENST00000472625 C12orf49Q9H741 205 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 PPP1R9AQ9ULJ8 1098 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 MAPK8IP3Q9UPT6 1336 aa4.59□□□□□ -1.67
XRN1-209ENST00000472625 SCN4AP35499 1836 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 BCORQ6W2J9 1755 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 RASSF10A6NK89 507 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 FZD9O00144 591 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 PRPF40AO75400 957 aaKnown RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 FBXO24O75426 580 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 U2AF1L5P0DN76 240 aaPredicted RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 ADH5P11766 374 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 HSP90B1P14625 803 aaKnown RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 RAB6AP20340 208 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 EPHX2P34913 555 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 ADMP35318 185 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 IARSP41252 1262 aaKnown RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 HTRA3P83110 453 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 U2AF1Q01081 240 aaKnown RBP eCLIP4.58□□□□□ -1.68
XRN1-209ENST00000472625 LMOD3Q0VAK6 560 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 CRY2Q49AN0 593 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 PARP10Q53GL7 1025 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 EAPPQ56P03 285 aaPredicted RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 HSP90AB3PQ58FF7 597 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 DTHD1Q6ZMT9 781 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 USP50Q70EL3 339 aaPredicted RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 TMC4Q7Z404 712 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 PPP1R42Q7Z4L9 355 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 SLC51AQ86UW1 340 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 IL17REQ8NFR9 667 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 RBM17Q96I25 401 aaKnown RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 CYP4F12Q9HCS2 524 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 HIF3AQ9Y2N7 669 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 ACTL7BQ9Y614 415 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 AFDNP55196 1824 aaKnown RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 ARFGEF2Q9Y6D5 1785 aa4.58□□□□□ -1.68
XRN1-209ENST00000472625 COL11A2P13942 1736 aaPredicted RBP4.58□□□□□ -1.68
XRN1-209ENST00000472625 MAP3K15Q6ZN16 1313 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 FAM95CA0A1B0GW59 222 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 AOC2O75106 756 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 DDNO94850 711 aaPredicted RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 A1BGP04217 495 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 CELA3AP09093 270 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 XRCC5P13010 732 aaKnown RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 GNA15P30679 374 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 NTF4P34130 210 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 GRIK1P39086 918 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 USP11P51784 963 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 SOX4Q06945 474 aaPredicted RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 TAF7Q15545 349 aaPredicted RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 KIF4BQ2VIQ3 1234 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 LDLRAD1Q5T700 205 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 NIM1KQ8IY84 436 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 GRIN3AQ8TCU5 1115 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 DUSP9Q99956 384 aaKnown RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 SRCIN1Q9C0H9 1055 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 ACSS3Q9H6R3 686 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 FAM105AQ9NUU6 356 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 TMEM39AQ9NV64 488 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 BABAM1Q9NWV8 329 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 ABT1Q9ULW3 272 aaKnown RBP4.57□□□□□ -1.68
XRN1-209ENST00000472625 AP4E1Q9UPM8 1137 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 SBF1O95248 1867 aa4.57□□□□□ -1.68
XRN1-209ENST00000472625 FER1L6Q2WGJ9 1857 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 LAMB4A4D0S4 1761 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 SIPA1L3O60292 1781 aaPredicted RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 FAM170BA6NMN3 283 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 RBAK-RBAKDNI3L0D1 243 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 DYNC1LI2O43237 492 aaPredicted RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 CYP11A1P05108 521 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 GSTP1P09211 210 aaKnown RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 MAP2K2P36507 400 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 IRAK1P51617 712 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 DAB2P98082 770 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 PTPN11Q06124 597 aaPredicted RBP4.56□□□□□ -1.68
XRN1-209ENST00000472625 DEFB115Q30KQ5 88 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 DTX1Q86Y01 620 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 CNTROBQ8N137 903 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 HHIPL1Q96JK4 782 aa4.56□□□□□ -1.68
XRN1-209ENST00000472625 FAM161BQ96MY7 647 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms