RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 TAF6LQ9Y6J9 622 aa19.9■□□□□ 0.78
COMMD3-210ENST00000472610 MCM3APO60318 1980 aa19.9■□□□□ 0.78
COMMD3-210ENST00000472610 LOC102724159A0A0B4J2E5 919 aa19.89■□□□□ 0.77
COMMD3-210ENST00000472610 DHX16O60231 1041 aaKnown RBP19.89■□□□□ 0.77
COMMD3-210ENST00000472610 BAATQ14032 418 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-210ENST00000472610 PWP2Q15269 919 aaKnown RBP19.89■□□□□ 0.77
COMMD3-210ENST00000472610 LRRC41Q15345 812 aa19.89■□□□□ 0.77
COMMD3-210ENST00000472610 MB21D2Q8IYB1 491 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-210ENST00000472610 MYH6P13533 1939 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 PTPDC1A2A3K4 754 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 KLRF2D3W0D1 207 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 NFIBO00712 420 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 SLC27A2O14975 620 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
COMMD3-210ENST00000472610 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
COMMD3-210ENST00000472610 TMEM67Q5HYA8 995 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 RNF20Q5VTR2 975 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 RNF207Q6ZRF8 634 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 C7orf61Q8IZ16 206 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 RGS22Q8NE09 1264 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 CLEC4DQ8WXI8 215 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 CPVLQ9H3G5 476 aa19.88■□□□□ 0.77
COMMD3-210ENST00000472610 ABCB11O95342 1321 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 PALM3A6NDB9 673 aaPredicted RBP19.87■□□□□ 0.77
COMMD3-210ENST00000472610 DUSP11O75319 330 aaKnown RBP19.87■□□□□ 0.77
COMMD3-210ENST00000472610 MCM5P33992 734 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 LRRC26Q2I0M4 334 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 CREB3L3Q68CJ9 461 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 CHST3Q7LGC8 479 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 IGDCC4Q8TDY8 1250 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 JMJD4Q9H9V9 463 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 VAT1LQ9HCJ6 419 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 MAD2L2Q9UI95 211 aa19.87■□□□□ 0.77
COMMD3-210ENST00000472610 PGK1P00558 417 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 ANTXR2P58335 489 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 GRM4Q14833 912 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 USH1GQ495M9 461 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 CATIPQ7Z7H3 387 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 FBXO11Q86XK2 927 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 STAG2Q8N3U4 1231 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 MORC4Q8TE76 937 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 TMEM87BQ96K49 555 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 MPHOSPH6Q99547 160 aaKnown RBP19.86■□□□□ 0.77
COMMD3-210ENST00000472610 TSEN34Q9BSV6 310 aaKnown RBP19.86■□□□□ 0.77
COMMD3-210ENST00000472610 KATNBL1Q9H079 304 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 SPC25Q9HBM1 224 aa19.86■□□□□ 0.77
COMMD3-210ENST00000472610 LCTP09848 1927 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 ADAMTS4O75173 837 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
COMMD3-210ENST00000472610 ADCYAP1R1P41586 468 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 TRAF1Q13077 416 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 QRICH1Q2TAL8 776 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 MCF2L2Q86YR7 1114 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 DNERQ8NFT8 737 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 PHF24Q9UPV7 400 aa19.85■□□□□ 0.77
COMMD3-210ENST00000472610 COLQQ9Y215 455 aaPredicted RBP19.85■□□□□ 0.77
COMMD3-210ENST00000472610 MRPL11Q9Y3B7 192 aaKnown RBP19.85■□□□□ 0.77
COMMD3-210ENST00000472610 ASTN1O14525 1302 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 B4DLN1 442 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 PRC1O43663 620 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 CALML3P27482 149 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 ALDH5A1P51649 535 aaPredicted RBP19.84■□□□□ 0.77
COMMD3-210ENST00000472610 MRPL12P52815 198 aaKnown RBP19.84■□□□□ 0.77
COMMD3-210ENST00000472610 RPS6P62753 249 aaKnown RBP19.84■□□□□ 0.77
COMMD3-210ENST00000472610 TROAPQ12815 778 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 HABP4Q5JVS0 413 aaKnown RBP19.84■□□□□ 0.77
COMMD3-210ENST00000472610 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 CHRDL2Q6WN34 429 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 SLC39A5Q6ZMH5 540 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 MAP3K14Q99558 947 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 AMNQ9BXJ7 453 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 VTA1Q9NP79 307 aa19.84■□□□□ 0.77
COMMD3-210ENST00000472610 SYNRGQ9UMZ2 1314 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 ATN1P54259 1190 aaPredicted RBP19.83■□□□□ 0.77
COMMD3-210ENST00000472610 TNFAIP2Q03169 654 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 SLC30A10Q6XR72 485 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 PCSK9Q8NBP7 692 aaKnown RBP19.83■□□□□ 0.77
COMMD3-210ENST00000472610 KLHDC9Q8NEP7 349 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 MTMR8Q96EF0 704 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 PURBQ96QR8 312 aaKnown RBP19.83■□□□□ 0.77
COMMD3-210ENST00000472610 RIOX1Q9H6W3 641 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 SENP2Q9HC62 589 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 PPP4R2Q9NY27 417 aa19.83■□□□□ 0.77
COMMD3-210ENST00000472610 MOXD2PA6NHM9 499 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 ZBTB5O15062 677 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 DDAH1O94760 285 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 CST5P28325 142 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-210ENST00000472610 LIFRP42702 1097 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 GJA9P57773 515 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 C1orf53Q5VUE5 145 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 NUP133Q8WUM0 1156 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 FERMT2Q96AC1 680 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 LENG1Q96BZ8 264 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-210ENST00000472610 UPF3AQ9H1J1 476 aaKnown RBP19.82■□□□□ 0.76
COMMD3-210ENST00000472610 LY9Q9HBG7 655 aa19.82■□□□□ 0.76
COMMD3-210ENST00000472610 ZMYND8Q9ULU4 1186 aaPredicted RBP19.82■□□□□ 0.76
COMMD3-210ENST00000472610 CEP290O15078 2479 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms