RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 BTBD7Q9P203 1132 aa18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 SMCHD1A6NHR9 2005 aa18.52■□□□□ 0.55
PCOLCE-205ENST00000472348 STRNO43815 780 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 CRHR2Q13324 411 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 ABRAQ8N0Z2 381 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 CCDC82Q8N4S0 544 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 ZMYND12Q9H0C1 365 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 CCPG1Q9ULG6 757 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 PCDHA1Q9Y5I3 950 aa18.51■□□□□ 0.55
PCOLCE-205ENST00000472348 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 PPP1R11O60927 126 aaPredicted RBP18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 CALML3P27482 149 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 GNA11P29992 359 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 MAPK4P31152 587 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 TXNRD2Q9NNW7 524 aa18.5■□□□□ 0.55
PCOLCE-205ENST00000472348 ZNFX1Q9P2E3 1918 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 JAK2O60674 1132 aa18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 BICD2Q8TD16 824 aa18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 ALG1Q9BT22 464 aa18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 MOV10L1Q9BXT6 1211 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-205ENST00000472348 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 STXBP3O00186 592 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 GJB2P29033 226 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 MRPL12P52815 198 aaKnown RBP18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 CPXCR1Q8N123 301 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 ANKRD13CQ8N6S4 541 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 FBXO18Q8NFZ0 1043 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 PLXNB2O15031 1838 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 PFASO15067 1338 aa18.48■□□□□ 0.55
PCOLCE-205ENST00000472348 TRPA1O75762 1119 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 GNRH1P01148 92 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 TRIM29Q14134 588 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 Q3C1V9 767 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 AGBL1Q96MI9 1066 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 TRERF1Q96PN7 1200 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 PAGR1Q9BTK6 254 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 PHF20Q9BVI0 1012 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 C6orf50Q9HD87 102 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 RIC8AQ9NPQ8 531 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
PCOLCE-205ENST00000472348 CASP8AP2Q9UKL3 1982 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 HSD17B4P51659 736 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 NAPAP54920 295 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 ARHGEF6Q15052 776 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 HEATR3Q7Z4Q2 680 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 CUL5Q93034 780 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 DDX11Q96FC9 970 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 RNF146Q9NTX7 359 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 RIPK3Q9Y572 518 aa18.46■□□□□ 0.55
PCOLCE-205ENST00000472348 FOSP01100 380 aaPredicted RBP18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 ALAS1P13196 640 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 ERCC3P19447 782 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 SP3Q02447 781 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 PLS1Q14651 629 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 COA7Q96BR5 231 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 C8orf76Q96K31 380 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 PSTPIP2Q9H939 334 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 CPA4Q9UI42 421 aa18.45■□□□□ 0.54
PCOLCE-205ENST00000472348 SMCO2A6NFE2 343 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 OPLAHO14841 1288 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 MMP1P03956 469 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 CLK2P49760 499 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 AP3B2Q13367 1082 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 USH1GQ495M9 461 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 LARP1BQ659C4 914 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 TYW1BQ6NUM6 668 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 TNS4Q8IZW8 715 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 BRMS1Q9HCU9 246 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 PCDHA4Q9UN74 947 aa18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-205ENST00000472348 PLXNA1Q9UIW2 1896 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 hCG_1642624A0A1W2PR95 340 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 M0R2N6 131 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 GPR25O00155 361 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 FCER1AP12319 257 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 ADCY7P51828 1080 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 SNAP25P60880 206 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 LACTBP83111 547 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 KIF22Q14807 665 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 SAFBQ15424 915 aaKnown RBP eCLIP18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 KRT40Q6A162 431 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
PCOLCE-205ENST00000472348 GPKOWQ92917 476 aaPredicted RBP eCLIP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms