RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
CLRN1-205ENST00000472224 DPP9Q86TI2 863 aa13.89□□□□□ -0.19
CLRN1-205ENST00000472224 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
CLRN1-205ENST00000472224 TNFRSF10AO00220 468 aa13.88□□□□□ -0.19
CLRN1-205ENST00000472224 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
CLRN1-205ENST00000472224 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
CLRN1-205ENST00000472224 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
CLRN1-205ENST00000472224 WTAPQ15007 396 aa13.88□□□□□ -0.19
CLRN1-205ENST00000472224 TMEM67Q5HYA8 995 aa13.88□□□□□ -0.19
CLRN1-205ENST00000472224 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
CLRN1-205ENST00000472224 PRC1O43663 620 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
CLRN1-205ENST00000472224 FOSL2P15408 326 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 CCND3P30281 292 aaPredicted RBP13.87□□□□□ -0.19
CLRN1-205ENST00000472224 ANTXR2P58335 489 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 KCTD2Q14681 263 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 SEC23AQ15436 765 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 SHHQ15465 462 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
CLRN1-205ENST00000472224 USP38Q8NB14 1042 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 USP6NLQ92738 828 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 LBHD1Q9BQE6 289 aaPredicted RBP13.87□□□□□ -0.19
CLRN1-205ENST00000472224 CPVLQ9H3G5 476 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 CCPG1Q9ULG6 757 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
CLRN1-205ENST00000472224 STRNO43815 780 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 PLA2G6O60733 806 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 REC8O95072 547 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 PGK2P07205 417 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 PARP1P09874 1014 aaKnown RBP13.86□□□□□ -0.19
CLRN1-205ENST00000472224 FDX1P10109 184 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
CLRN1-205ENST00000472224 ALAS1P13196 640 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 OAZ1P54368 228 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 GPATCH4Q5T3I0 446 aaKnown RBP13.86□□□□□ -0.19
CLRN1-205ENST00000472224 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
CLRN1-205ENST00000472224 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 RNF146Q9NTX7 359 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 FLRT1Q9NZU1 646 aa13.86□□□□□ -0.19
CLRN1-205ENST00000472224 REV3LO60673 3130 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 COBLO75128 1261 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 MCM5P33992 734 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 TJAP1Q5JTD0 557 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 ANKRD35Q8N283 1001 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
CLRN1-205ENST00000472224 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
CLRN1-205ENST00000472224 ZNF536O15090 1300 aa13.85□□□□□ -0.19
CLRN1-205ENST00000472224 LCTP09848 1927 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 CYP2C19P33261 490 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 COL9A3Q14050 684 aaPredicted RBP13.84□□□□□ -0.19
CLRN1-205ENST00000472224 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 CHST13Q8NET6 341 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 SENP6Q9GZR1 1112 aaPredicted RBP13.84□□□□□ -0.19
CLRN1-205ENST00000472224 LY9Q9HBG7 655 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
CLRN1-205ENST00000472224 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 SH2B2O14492 632 aaPredicted RBP13.83□□□□□ -0.2
CLRN1-205ENST00000472224 ICAM1P05362 532 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 HOXC6P09630 235 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.2
CLRN1-205ENST00000472224 KRT32Q14532 448 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
CLRN1-205ENST00000472224 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 USH1GQ495M9 461 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 IGDCC4Q8TDY8 1250 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 FAM122AQ96E09 287 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 MAML3Q96JK9 1138 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 TCEANC2Q96MN5 208 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 XIRP2A4UGR9 3374 aa13.83□□□□□ -0.2
CLRN1-205ENST00000472224 TMEM265A0A087WTH1 108 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 CNGA1P29973 690 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
CLRN1-205ENST00000472224 GRM4Q14833 912 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 OLFML2BQ68BL8 750 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms