RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 DHX16O60231 1041 aaKnown RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 BAATQ14032 418 aaPredicted RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 GRM4Q14833 912 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 CDC37Q16543 378 aaPredicted RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 QRICH1Q2TAL8 776 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 USH1GQ495M9 461 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 TMTC2Q8N394 836 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 C11orf49Q9H6J7 331 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 PTPDC1A2A3K4 754 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 CCDC69A6NI79 296 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ASB14A6NK59 587 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
SYN3-211ENST00000472027 AKR1A1P14550 325 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 LIFRP42702 1097 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ACVR2BQ13705 512 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ADCK5Q3MIX3 580 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 NFXL1Q6ZNB6 911 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 RNF207Q6ZRF8 634 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ARMCX2Q7L311 632 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 FBXO11Q86XK2 927 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ZNF654Q8IZM8 581 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 NUP133Q8WUM0 1156 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 MTMR8Q96EF0 704 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
SYN3-211ENST00000472027 ASTN1O14525 1302 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 ABCB11O95342 1321 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 DNM1LO00429 736 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 CYTH3O43739 400 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 REC8O95072 547 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 RARBP10826 455 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 COL6A1P12109 1028 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 CALML3P27482 149 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 HSPA4P34932 840 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 RPS6P62753 249 aaKnown RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 EXOSC10Q01780 885 aaKnown RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 KRT32Q14532 448 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 SLC35G1Q2M3R5 365 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 DHX32Q7L7V1 743 aaKnown RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 RGS22Q8NE09 1264 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 TBC1D5Q92609 795 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 KCNB2Q92953 911 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 MYL10Q9BUA6 226 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
SYN3-211ENST00000472027 ZHX1Q9UKY1 873 aaPredicted RBP10.65□□□□□ -0.7
SYN3-211ENST00000472027 KIAA0100Q14667 2235 aaKnown RBP10.65□□□□□ -0.71
SYN3-211ENST00000472027 ZBTB5O15062 677 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 DDAH1O94760 285 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 SLC30A10Q6XR72 485 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 MCF2L2Q86YR7 1114 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 TCEANC2Q96MN5 208 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 PIGSQ96S52 555 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 AMNQ9BXJ7 453 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 SENP6Q9GZR1 1112 aaPredicted RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 MAF1Q9H063 256 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 XPNPEP3Q9NQH7 507 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 ADD3Q9UEY8 706 aaKnown RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 SNX14Q9Y5W7 946 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 SLC12A7Q9Y666 1083 aa10.64□□□□□ -0.71
SYN3-211ENST00000472027 DDX49Q9Y6V7 483 aaKnown RBP10.64□□□□□ -0.71
SYN3-211ENST00000472027 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 KBTBD13C9JR72 458 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 EVI5O60447 810 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 PPP1R11O60927 126 aaPredicted RBP10.63□□□□□ -0.71
SYN3-211ENST00000472027 PGK1P00558 417 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
SYN3-211ENST00000472027 CALM1P0DP23 149 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 CALM2P0DP24 149 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 CALM3P0DP25 149 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 RXRAP19793 462 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 KIF5BP33176 963 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 LRRC41Q15345 812 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 EEPD1Q7L9B9 569 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 RNF180Q86T96 592 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 SGMS1Q86VZ5 419 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 MORC4Q8TE76 937 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 LENG1Q96BZ8 264 aaPredicted RBP10.63□□□□□ -0.71
SYN3-211ENST00000472027 PCDHA1Q9Y5I3 950 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 PLXNA1Q9UIW2 1896 aa10.63□□□□□ -0.71
SYN3-211ENST00000472027 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
SYN3-211ENST00000472027 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms