RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PTGS1P23219 599 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 PSMC6P62333 389 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 KHSRPQ92945 711 aaKnown RBP eCLIP22.76■■□□□ 1.233e-12■□□□□ 9.5
SORT1-203ENST00000471996 HLA-CQ95604 372 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
SORT1-203ENST00000471996 MKNK2Q9HBH9 465 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 HOMER2Q9NSB8 354 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 CLIP2Q9UDT6 1046 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 SOWAHBA6NEL2 793 aa22.75■■□□□ 1.23
SORT1-203ENST00000471996 KIF1BPQ96EK5 621 aa22.75■■□□□ 1.23
SORT1-203ENST00000471996 BOLA2Q9H3K6 86 aa22.75■■□□□ 1.23
SORT1-203ENST00000471996 ACAD9Q9H845 621 aa22.75■■□□□ 1.23
SORT1-203ENST00000471996 Q9Y3F1 56 aa22.75■■□□□ 1.23
SORT1-203ENST00000471996 PRRC2BQ5JSZ5 2229 aaKnown RBP22.75■■□□□ 1.23
SORT1-203ENST00000471996 IQSEC1Q6DN90 963 aa22.74■■□□□ 1.23
SORT1-203ENST00000471996 MKL1Q969V6 931 aa22.74■■□□□ 1.23
SORT1-203ENST00000471996 SLC9A7Q96T83 725 aa22.74■■□□□ 1.23
SORT1-203ENST00000471996 A1CFQ9NQ94 594 aaKnown RBP22.74■■□□□ 1.23
SORT1-203ENST00000471996 MCM3APO60318 1980 aa22.74■■□□□ 1.23
SORT1-203ENST00000471996 TRANK1O15050 2925 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
SORT1-203ENST00000471996 IGKV6D-41A0A0C4DH26 115 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 SUPT20HL2P0C7V6 817 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 FDX1P10109 184 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 ACTN1P12814 892 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 TAP1Q03518 808 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 SBK1Q52WX2 424 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 DEFB128Q7Z7B8 93 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 PHOSPHO2Q8TCD6 241 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 ARNTL2Q8WYA1 636 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 PUS7LQ9H0K6 701 aaKnown RBP22.73■■□□□ 1.23
SORT1-203ENST00000471996 PDGFCQ9NRA1 345 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 TRMT13Q9NUP7 481 aaKnown RBP22.73■■□□□ 1.23
SORT1-203ENST00000471996 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
SORT1-203ENST00000471996 FAM86C2PA6NEL3 165 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 CYP2C9P11712 490 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 TAPT1Q6NXT6 567 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 STK11IPQ8N1F8 1099 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 HAUS7Q99871 368 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 SYNPO2Q9UMS6 1093 aa22.72■■□□□ 1.23
SORT1-203ENST00000471996 PI4K2BG5E9Z4 385 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 ARHGEF15O94989 841 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 ATP5JP18859 108 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 TMEM63BQ5T3F8 832 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 RPAP2Q8IXW5 612 aaPredicted RBP22.71■■□□□ 1.23
SORT1-203ENST00000471996 GMCL1P1Q8NEA9 526 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 RNF146Q9NTX7 359 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 DDX49Q9Y6V7 483 aaKnown RBP22.71■■□□□ 1.23
SORT1-203ENST00000471996 LRRC37A2A6NM11 1700 aa22.71■■□□□ 1.23
SORT1-203ENST00000471996 BMP3P12645 472 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 GRB10Q13322 594 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 ZSCAN25Q6NSZ9 544 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 FBXO16Q8IX29 292 aaPredicted RBP22.7■■□□□ 1.22
SORT1-203ENST00000471996 CEP95Q96GE4 821 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 MTMR4Q9NYA4 1195 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 TNKSO95271 1327 aa22.7■■□□□ 1.22
SORT1-203ENST00000471996 ZNF536O15090 1300 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 KIF28PB7ZC32 967 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 RFC2P35250 354 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 TKFCQ3LXA3 575 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 SLFN13Q68D06 897 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 EEPD1Q7L9B9 569 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 ALYREFQ86V81 257 aaKnown RBP22.69■■□□□ 1.22
SORT1-203ENST00000471996 HERC6Q8IVU3 1022 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 LRRC47Q8N1G4 583 aaKnown RBP22.69■■□□□ 1.22
SORT1-203ENST00000471996 STRBPQ96SI9 672 aaKnown RBP22.69■■□□□ 1.22
SORT1-203ENST00000471996 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
SORT1-203ENST00000471996 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 TMEM232C9JQI7 657 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 LPXNO60711 386 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 TTLL1O95922 423 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 TRERF1Q96PN7 1200 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 CD320Q9NPF0 282 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 POLR3EQ9NVU0 708 aa22.68■■□□□ 1.22
SORT1-203ENST00000471996 PIEZO1Q92508 2521 aa22.67■■□□□ 1.22
SORT1-203ENST00000471996 GSG1L2A8MUP6 293 aa22.67■■□□□ 1.22
SORT1-203ENST00000471996 STAT2P52630 851 aa22.67■■□□□ 1.22
SORT1-203ENST00000471996 ZNF444Q8N0Y2 327 aaPredicted RBP22.67■■□□□ 1.22
SORT1-203ENST00000471996 VTA1Q9NP79 307 aa22.67■■□□□ 1.22
SORT1-203ENST00000471996 DUSP28Q4G0W2 176 aa22.66■■□□□ 1.22
SORT1-203ENST00000471996 MORC4Q8TE76 937 aa22.66■■□□□ 1.22
SORT1-203ENST00000471996 CHURC1Q8WUH1 139 aa22.66■■□□□ 1.22
SORT1-203ENST00000471996 CYP39A1Q9NYL5 469 aa22.66■■□□□ 1.22
SORT1-203ENST00000471996 PRR33A8MZF0 331 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 PITPNM1O00562 1244 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 RAB11FIP3O75154 756 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 PRDM1O75626 825 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 IQCF3P0C7M6 154 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 ALAS1P13196 640 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 PURAQ00577 322 aaKnown RBP22.65■■□□□ 1.22
SORT1-203ENST00000471996 FAM160B2Q86V87 743 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 STAG1Q8WVM7 1258 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 ZNF287Q9HBT7 754 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 LMCD1Q9NZU5 365 aa22.65■■□□□ 1.22
SORT1-203ENST00000471996 SPRED2Q7Z698 418 aa22.64■■□□□ 1.21
SORT1-203ENST00000471996 RETREG2Q8NC44 543 aa22.64■■□□□ 1.21
SORT1-203ENST00000471996 MTG1Q9BT17 334 aaPredicted RBP22.64■■□□□ 1.21
SORT1-203ENST00000471996 FTOQ9C0B1 505 aaKnown RBP eCLIP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms