RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SMPD1P17405 629 aa23.62■■□□□ 1.37
CCDC78-208ENST00000471861 PSMC6P62333 389 aa23.62■■□□□ 1.37
CCDC78-208ENST00000471861 NOL8Q76FK4 1167 aaKnown RBP23.62■■□□□ 1.37
CCDC78-208ENST00000471861 SYNPO2Q9UMS6 1093 aa23.62■■□□□ 1.37
CCDC78-208ENST00000471861 LCTP09848 1927 aa23.62■■□□□ 1.37
CCDC78-208ENST00000471861 PLIN4Q96Q06 1357 aa23.62■■□□□ 1.37
CCDC78-208ENST00000471861 TRANK1O15050 2925 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 MICALL1Q8N3F8 863 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 SCLYQ96I15 445 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 AGBL1Q96MI9 1066 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 PDGFCQ9NRA1 345 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 RNF146Q9NTX7 359 aa23.61■■□□□ 1.37
CCDC78-208ENST00000471861 TTLL1O95922 423 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 BMP3P12645 472 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 KCNQ1P51787 676 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
CCDC78-208ENST00000471861 SLFN13Q68D06 897 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 TAPT1Q6NXT6 567 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 FBXO16Q8IX29 292 aaPredicted RBP23.6■■□□□ 1.37
CCDC78-208ENST00000471861 IL27Q8NEV9 243 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 PCDHA11Q9Y5I1 949 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 SLC4A7Q9Y6M7 1214 aa23.6■■□□□ 1.37
CCDC78-208ENST00000471861 TMEM232C9JQI7 657 aa23.59■■□□□ 1.37
CCDC78-208ENST00000471861 DYNC1LI2O43237 492 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-208ENST00000471861 SMARCA5O60264 1052 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-208ENST00000471861 COG6Q9Y2V7 657 aa23.59■■□□□ 1.37
CCDC78-208ENST00000471861 ASB14A6NK59 587 aa23.58■■□□□ 1.37
CCDC78-208ENST00000471861 STAT2P52630 851 aa23.58■■□□□ 1.37
CCDC78-208ENST00000471861 EEPD1Q7L9B9 569 aa23.58■■□□□ 1.37
CCDC78-208ENST00000471861 KBTBD3Q8NAB2 608 aa23.58■■□□□ 1.37
CCDC78-208ENST00000471861 APPBP2Q92624 585 aa23.58■■□□□ 1.37
CCDC78-208ENST00000471861 EPOPA6NHQ4 379 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 ZBBXA8MT70 800 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 M0R2C6 588 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 RFXAPO00287 272 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 GPAA1O43292 621 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 ATP2A2P16615 1042 aaKnown RBP23.57■■□□□ 1.36
CCDC78-208ENST00000471861 TTLL4Q14679 1199 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 MUM1L1Q5H9M0 696 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 RASGRP2Q7LDG7 609 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 ZNF444Q8N0Y2 327 aaPredicted RBP23.57■■□□□ 1.36
CCDC78-208ENST00000471861 FAM122AQ96E09 287 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 PURBQ96QR8 312 aaKnown RBP23.57■■□□□ 1.36
CCDC78-208ENST00000471861 AP5M1Q9H0R1 490 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 ALDH8A1Q9H2A2 487 aaPredicted RBP23.57■■□□□ 1.36
CCDC78-208ENST00000471861 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
CCDC78-208ENST00000471861 PRRC2BQ5JSZ5 2229 aaKnown RBP23.56■■□□□ 1.36
CCDC78-208ENST00000471861 FDX1P10109 184 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 TDO2P48775 406 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 SNAP25P60880 206 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 NEDD1Q8NHV4 660 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 CHMP4CQ96CF2 233 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 TRERF1Q96PN7 1200 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 TSPYL2Q9H2G4 693 aaPredicted RBP23.56■■□□□ 1.36
CCDC78-208ENST00000471861 TRMT13Q9NUP7 481 aaKnown RBP23.56■■□□□ 1.36
CCDC78-208ENST00000471861 MTCH2Q9Y6C9 303 aa23.56■■□□□ 1.36
CCDC78-208ENST00000471861 SCN5AQ14524 2016 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 ERC2O15083 957 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 ARHGEF15O94989 841 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 CA3P07451 260 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 CYP2C9P11712 490 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 ALAS1P13196 640 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 TSHZ3Q63HK5 1081 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 KRT40Q6A162 431 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 RPUSD2Q8IZ73 545 aaKnown RBP23.55■■□□□ 1.36
CCDC78-208ENST00000471861 GMCL1Q96IK5 515 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 SEZ6LQ9BYH1 1024 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 LRRCC1Q9C099 1032 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 CYP39A1Q9NYL5 469 aa23.55■■□□□ 1.36
CCDC78-208ENST00000471861 ZEB2O60315 1214 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 TKFCQ3LXA3 575 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 IQSEC1Q6DN90 963 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 STAG1Q8WVM7 1258 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 ECHDC1Q9NTX5 307 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 ISY1Q9ULR0 285 aaKnown RBP23.54■■□□□ 1.36
CCDC78-208ENST00000471861 Q9Y3F1 56 aa23.54■■□□□ 1.36
CCDC78-208ENST00000471861 RNF113AO15541 343 aaKnown RBP23.53■■□□□ 1.36
CCDC78-208ENST00000471861 POU3F3P20264 500 aaPredicted RBP23.53■■□□□ 1.36
CCDC78-208ENST00000471861 MORC4Q8TE76 937 aa23.53■■□□□ 1.36
CCDC78-208ENST00000471861 C1QTNF1Q9BXJ1 281 aa23.53■■□□□ 1.36
CCDC78-208ENST00000471861 CERS4Q9HA82 394 aa23.53■■□□□ 1.36
CCDC78-208ENST00000471861 ZNF287Q9HBT7 754 aa23.53■■□□□ 1.36
CCDC78-208ENST00000471861 TSPY3P0CV98 308 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 TSPY8P0CW00 308 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 MCCP23508 829 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 SLC1A4P43007 532 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 KCTD1Q719H9 257 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 DEFB128Q7Z7B8 93 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 IFNL3Q8IZI9 196 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 VTA1Q9NP79 307 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 TNKSO95271 1327 aa23.52■■□□□ 1.36
CCDC78-208ENST00000471861 PFKMP08237 780 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 MS4A1P11836 297 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 GNAT2P19087 354 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 HOXD11P31277 338 aaPredicted RBP23.51■■□□□ 1.35
CCDC78-208ENST00000471861 PURAQ00577 322 aaKnown RBP23.51■■□□□ 1.35
CCDC78-208ENST00000471861 TFAP4Q01664 338 aa23.51■■□□□ 1.35
CCDC78-208ENST00000471861 IKQ13123 557 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms