RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 SLC16A2P36021 539 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 TBX2Q13207 712 aaPredicted RBP17.2■□□□□ 0.34
GCOM1-206ENST00000471563 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 SIAH1Q8IUQ4 282 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
GCOM1-206ENST00000471563 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 KCNH3Q9ULD8 1083 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 ATRNL1Q5VV63 1379 aa17.2■□□□□ 0.34
GCOM1-206ENST00000471563 CALML3P27482 149 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 LONRF3Q496Y0 759 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 FOXP4Q8IVH2 680 aaPredicted RBP17.19■□□□□ 0.34
GCOM1-206ENST00000471563 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 FANCLQ9NW38 375 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 CEP131Q9UPN4 1083 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
GCOM1-206ENST00000471563 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
GCOM1-206ENST00000471563 MCM7P33993 719 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 NAPAP54920 295 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 GOLGA8FQ08AF8 430 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 ZNF543Q08ER8 600 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 GOLGA8DPQ0D2H9 430 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
GCOM1-206ENST00000471563 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
GCOM1-206ENST00000471563 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.19■□□□□ 0.34
GCOM1-206ENST00000471563 PTGER2P43116 358 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 PTGDRQ13258 359 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 UBXN6Q9BZV1 441 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 SEC63Q9UGP8 760 aaKnown RBP17.18■□□□□ 0.34
GCOM1-206ENST00000471563 RASSF7Q02833 373 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 PDILTQ8N807 584 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 COA7Q96BR5 231 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
GCOM1-206ENST00000471563 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
GCOM1-206ENST00000471563 FOXN1O15353 648 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 EGFRP00533 1210 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 GH2P01242 217 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 SMARCA1P28370 1054 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 CASQ1P31415 396 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 PRELPP51888 382 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 INF2Q27J81 1249 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 TEX35Q5T0J7 233 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 AGBL3Q8NEM8 1001 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 NLGN2Q8NFZ4 835 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 BAG1Q99933 345 aaPredicted RBP17.17■□□□□ 0.34
GCOM1-206ENST00000471563 TMEM39BQ9GZU3 492 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 KANSL2Q9H9L4 492 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 PCDHA5Q9Y5H7 936 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 SMCO2A6NFE2 343 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 STX10O60499 249 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 ICA1Q05084 483 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
GCOM1-206ENST00000471563 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 JMJD4Q9H9V9 463 aa17.17■□□□□ 0.34
GCOM1-206ENST00000471563 FER1L6Q2WGJ9 1857 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 SEC31AO94979 1220 aaKnown RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 BMP6P22004 513 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 DAGLBQ8NCG7 672 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 UPF1Q92900 1129 aaKnown RBP eCLIP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 MRFAP1Q9Y605 127 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 A0A087X0B3 334 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 WNT10BO00744 389 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 TBC1D8O95759 1140 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 GNG11P61952 73 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 MDM2Q00987 491 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 IL17AQ16552 155 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 CC2D1AQ6P1N0 951 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 TMEM179Q6ZVK1 233 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 WDR24Q96S15 920 aa17.16■□□□□ 0.34
GCOM1-206ENST00000471563 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
GCOM1-206ENST00000471563 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
GCOM1-206ENST00000471563 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
GCOM1-206ENST00000471563 MIGA2Q7L4E1 593 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms