RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 DDX17Q92841 729 aaKnown RBP4.51□□□□□ -1.69
CSMD2-208ENST00000471438 SLC12A5Q9H2X9 1139 aa4.51□□□□□ -1.69
CSMD2-208ENST00000471438 PNNQ9H307 717 aaKnown RBP4.51□□□□□ -1.69
CSMD2-208ENST00000471438 UPF2Q9HAU5 1272 aaKnown RBP4.51□□□□□ -1.69
CSMD2-208ENST00000471438 ABCB6Q9NP58 842 aa4.51□□□□□ -1.69
CSMD2-208ENST00000471438 SSU72Q9NP77 194 aaKnown RBP4.51□□□□□ -1.69
CSMD2-208ENST00000471438 ZBTB40Q9NUA8 1239 aa4.51□□□□□ -1.69
CSMD2-208ENST00000471438 DDX19BQ9UMR2 479 aa4.51□□□□□ -1.69
CSMD2-208ENST00000471438 TNRC18O15417 2968 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 AKAP12Q02952 1782 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 N4BP2Q86UW6 1770 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 COL22A1Q8NFW1 1626 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 EVC2Q86UK5 1308 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 MON2Q7Z3U7 1717 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 GNAT3A8MTJ3 354 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 FOXN1O15353 648 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 SASH1O94885 1247 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 XRCC6P12956 609 aaKnown RBP eCLIP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 XRCC5P13010 732 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 TMPOP42166 694 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 ZNF157P51786 506 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 FAM214BQ7L5A3 538 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 NPAS4Q8IUM7 802 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 UNC5CLQ8IV45 518 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 WDR89Q96FK6 387 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 C22orf23Q9BZE7 217 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 ZC3H12CQ9C0D7 883 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 PDGFDQ9GZP0 370 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 XYLT2Q9H1B5 865 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 CHMP4BQ9H444 224 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 POGKQ9P215 609 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 CCDC9Q9Y3X0 531 aaKnown RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 EID1Q9Y6B2 187 aa4.5□□□□□ -1.69
CSMD2-208ENST00000471438 IBTKQ9P2D0 1353 aaPredicted RBP4.5□□□□□ -1.69
CSMD2-208ENST00000471438 KNDC1Q76NI1 1749 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 IPO8O15397 1037 aaKnown RBP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 GRIN3BO60391 1043 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 TRIM37O94972 964 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 BRD1O95696 1058 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 INSRRP14616 1297 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 MRE11P49959 708 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 FCGRTP55899 365 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 NUCB1Q02818 461 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 DSC3Q14574 896 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 PUM1Q14671 1186 aaKnown RBP eCLIP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 SPATS1Q496A3 300 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 ZNF385BQ569K4 471 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 BMP2KLQ5H9B9 411 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 ATF7IPQ6VMQ6 1270 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 EPS8L3Q8TE67 593 aaKnown RBP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 KRT82Q9NSB4 513 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 TMEM39AQ9NV64 488 aa4.49□□□□□ -1.69
CSMD2-208ENST00000471438 BIN2Q9UBW5 565 aaPredicted RBP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 GPN3Q9UHW5 284 aaPredicted RBP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 GOLGB1Q14789 3259 aaKnown RBP4.49□□□□□ -1.69
CSMD2-208ENST00000471438 SLIT2O94813 1529 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 GOLGA6L3A6NEY3 463 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 OTOL1A6NHN0 477 aaPredicted RBP4.48□□□□□ -1.69
CSMD2-208ENST00000471438 OVOL3O00110 214 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 GSTP1P09211 210 aaKnown RBP4.48□□□□□ -1.69
CSMD2-208ENST00000471438 ZNF853P0CG23 659 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 TRIM27P14373 513 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 DLG4P78352 724 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 PLCB3Q01970 1234 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 FAAP100Q0VG06 881 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 GRM2Q14416 872 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 TMC7Q7Z402 723 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 TMEM151BQ8IW70 566 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 SSH1Q8WYL5 1049 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 KCNB2Q92953 911 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 GCC1Q96CN9 775 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 CRELD1Q96HD1 420 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 KIF2CQ99661 725 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 CCDC86Q9H6F5 360 aaKnown RBP4.48□□□□□ -1.69
CSMD2-208ENST00000471438 ATP13A1Q9HD20 1204 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 RRAGDQ9NQL2 400 aaPredicted RBP4.48□□□□□ -1.69
CSMD2-208ENST00000471438 SLC52A1Q9NWF4 448 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 TNNQ9UQP3 1299 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 ATP7BP35670 1465 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 AK9Q5TCS8 1911 aa4.48□□□□□ -1.69
CSMD2-208ENST00000471438 RFXAPO00287 272 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 FYB1O15117 783 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 CANXP27824 592 aaKnown RBP4.47□□□□□ -1.69
CSMD2-208ENST00000471438 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
CSMD2-208ENST00000471438 TERF1P54274 439 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 EXOSC9Q06265 439 aaKnown RBP4.47□□□□□ -1.69
CSMD2-208ENST00000471438 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 KIF4BQ2VIQ3 1234 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 TTC6Q86TZ1 520 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 ISL2Q96A47 359 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 ALPK1Q96QP1 1244 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 PPP1R9BQ96SB3 815 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 EMILIN2Q9BXX0 1053 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 DCTN4Q9UJW0 460 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 AKAP2Q9Y2D5 859 aa4.47□□□□□ -1.69
CSMD2-208ENST00000471438 CPSF1Q10570 1443 aaKnown RBP4.46□□□□□ -1.69
CSMD2-208ENST00000471438 YTHDC2Q9H6S0 1430 aaKnown RBP4.46□□□□□ -1.69
CSMD2-208ENST00000471438 NALCNQ8IZF0 1738 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms