RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 F8W735 103 aaPredicted RBP8.82□□□□□ -1
SMC5-202ENST00000471372 MEIS1O00470 390 aa8.82□□□□□ -1
SMC5-202ENST00000471372 AQP7O14520 342 aa8.82□□□□□ -1
SMC5-202ENST00000471372 ZEB2O60315 1214 aa8.82□□□□□ -1
SMC5-202ENST00000471372 GLRX3O76003 335 aaKnown RBP8.82□□□□□ -1
SMC5-202ENST00000471372 ALX3O95076 343 aa8.82□□□□□ -1
SMC5-202ENST00000471372 ATF3P18847 181 aa8.82□□□□□ -1
SMC5-202ENST00000471372 ITIH2P19823 946 aa8.82□□□□□ -1
SMC5-202ENST00000471372 SCNN1BP51168 640 aa8.82□□□□□ -1
SMC5-202ENST00000471372 CCSAPQ6IQ19 270 aaPredicted RBP8.82□□□□□ -1
SMC5-202ENST00000471372 ZBTB46Q86UZ6 589 aa8.82□□□□□ -1
SMC5-202ENST00000471372 NXPE1Q8N323 547 aa8.82□□□□□ -1
SMC5-202ENST00000471372 PLVAPQ9BX97 442 aa8.82□□□□□ -1
SMC5-202ENST00000471372 PRR13Q9NZ81 148 aa8.82□□□□□ -1
SMC5-202ENST00000471372 TNKSO95271 1327 aa8.81□□□□□ -1
SMC5-202ENST00000471372 NFICP08651 508 aa8.81□□□□□ -1
SMC5-202ENST00000471372 PYGMP11217 842 aa8.81□□□□□ -1
SMC5-202ENST00000471372 ADCYAP1R1P41586 468 aa8.81□□□□□ -1
SMC5-202ENST00000471372 USP11P51784 963 aa8.81□□□□□ -1
SMC5-202ENST00000471372 SYDE2Q5VT97 1194 aa8.81□□□□□ -1
SMC5-202ENST00000471372 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
SMC5-202ENST00000471372 PASD1Q8IV76 773 aa8.81□□□□□ -1
SMC5-202ENST00000471372 PPIL6Q8IXY8 311 aa8.81□□□□□ -1
SMC5-202ENST00000471372 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
SMC5-202ENST00000471372 ORAI3Q9BRQ5 295 aa8.81□□□□□ -1
SMC5-202ENST00000471372 PHF20Q9BVI0 1012 aa8.81□□□□□ -1
SMC5-202ENST00000471372 APOBEC2Q9Y235 224 aaKnown RBP8.81□□□□□ -1
SMC5-202ENST00000471372 STXBP3O00186 592 aa8.8□□□□□ -1
SMC5-202ENST00000471372 SIGLEC6O43699 453 aa8.8□□□□□ -1
SMC5-202ENST00000471372 THBDP07204 575 aa8.8□□□□□ -1
SMC5-202ENST00000471372 MTDHQ86UE4 582 aaKnown RBP8.8□□□□□ -1
SMC5-202ENST00000471372 ANKLE2Q86XL3 938 aa8.8□□□□□ -1
SMC5-202ENST00000471372 TTC8Q8TAM2 541 aa8.8□□□□□ -1
SMC5-202ENST00000471372 FRS2Q8WU20 508 aa8.8□□□□□ -1
SMC5-202ENST00000471372 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
SMC5-202ENST00000471372 COPS5Q92905 334 aa8.8□□□□□ -1
SMC5-202ENST00000471372 GPRC5CQ9NQ84 441 aa8.8□□□□□ -1
SMC5-202ENST00000471372 ENAMQ9NRM1 1142 aa8.8□□□□□ -1
SMC5-202ENST00000471372 CHST7Q9NS84 486 aa8.8□□□□□ -1
SMC5-202ENST00000471372 NOB1Q9ULX3 412 aaKnown RBP8.8□□□□□ -1
SMC5-202ENST00000471372 CBX4O00257 560 aa8.79□□□□□ -1
SMC5-202ENST00000471372 ARNTLO00327 626 aa8.79□□□□□ -1
SMC5-202ENST00000471372 PRPF3O43395 683 aaKnown RBP8.79□□□□□ -1
SMC5-202ENST00000471372 PRKD3O94806 890 aa8.79□□□□□ -1
SMC5-202ENST00000471372 PRAMEF1O95521 474 aa8.79□□□□□ -1
SMC5-202ENST00000471372 EOMESO95936 686 aa8.79□□□□□ -1
SMC5-202ENST00000471372 IGHA1P01876 353 aa8.79□□□□□ -1
SMC5-202ENST00000471372 ELNP15502 786 aa8.79□□□□□ -1
SMC5-202ENST00000471372 TRIM28Q13263 835 aaKnown RBP8.79□□□□□ -1
SMC5-202ENST00000471372 CDK5R2Q13319 367 aa8.79□□□□□ -1
SMC5-202ENST00000471372 DDX53Q86TM3 631 aaKnown RBP8.79□□□□□ -1
SMC5-202ENST00000471372 TMEM130Q8N3G9 435 aa8.79□□□□□ -1
SMC5-202ENST00000471372 TOP6BLQ8N6T0 577 aa8.79□□□□□ -1
SMC5-202ENST00000471372 IGSF22Q8N9C0 903 aa8.79□□□□□ -1
SMC5-202ENST00000471372 NPLOC4Q8TAT6 608 aa8.79□□□□□ -1
SMC5-202ENST00000471372 TMEFF2Q9UIK5 374 aaPredicted RBP8.79□□□□□ -1
SMC5-202ENST00000471372 TPX2Q9ULW0 747 aaKnown RBP8.79□□□□□ -1
SMC5-202ENST00000471372 SART1O43290 800 aaKnown RBP8.78□□□□□ -1
SMC5-202ENST00000471372 GAS2O43903 313 aaKnown RBP8.78□□□□□ -1
SMC5-202ENST00000471372 CAND2O75155 1236 aa8.78□□□□□ -1
SMC5-202ENST00000471372 F2P00734 622 aa8.78□□□□□ -1
SMC5-202ENST00000471372 CD3EP07766 207 aa8.78□□□□□ -1
SMC5-202ENST00000471372 CTSKP43235 329 aa8.78□□□□□ -1
SMC5-202ENST00000471372 IL2P60568 153 aa8.78□□□□□ -1
SMC5-202ENST00000471372 SNRPNP63162 240 aaKnown RBP8.78□□□□□ -1
SMC5-202ENST00000471372 POU4F1Q01851 419 aa8.78□□□□□ -1
SMC5-202ENST00000471372 DSG1Q02413 1049 aa8.78□□□□□ -1
SMC5-202ENST00000471372 BIRC2Q13490 618 aa8.78□□□□□ -1
SMC5-202ENST00000471372 UBE4AQ14139 1066 aa8.78□□□□□ -1
SMC5-202ENST00000471372 SGO2Q562F6 1265 aa8.78□□□□□ -1
SMC5-202ENST00000471372 CRTC3Q6UUV7 619 aa8.78□□□□□ -1
SMC5-202ENST00000471372 LINC00114Q6XXX2 140 aa8.78□□□□□ -1
SMC5-202ENST00000471372 KIF18BQ86Y91 864 aa8.78□□□□□ -1
SMC5-202ENST00000471372 DTWD2Q8NBA8 298 aa8.78□□□□□ -1
SMC5-202ENST00000471372 SMC1BQ8NDV3 1235 aa8.78□□□□□ -1
SMC5-202ENST00000471372 Q96M66 194 aa8.78□□□□□ -1
SMC5-202ENST00000471372 RPS6KC1Q96S38 1066 aa8.78□□□□□ -1
SMC5-202ENST00000471372 ZNF180Q9UJW8 692 aa8.78□□□□□ -1
SMC5-202ENST00000471372 COQ6Q9Y2Z9 468 aa8.78□□□□□ -1
SMC5-202ENST00000471372 E2F8A0AVK6 867 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 ARVCFO00192 962 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 MSCO60682 206 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 FKBP9O95302 570 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 NMIQ13287 307 aaPredicted RBP8.77□□□□□ -1.01
SMC5-202ENST00000471372 SART3Q15020 963 aaKnown RBP8.77□□□□□ -1.01
SMC5-202ENST00000471372 ABCB5Q2M3G0 1257 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 IQSEC1Q6DN90 963 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 SEZ6L2Q6UXD5 910 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 FKBP9P1Q75LS8 142 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 ZC3H7AQ8IWR0 971 aaKnown RBP8.77□□□□□ -1.01
SMC5-202ENST00000471372 GPR101Q96P66 508 aaPredicted RBP8.77□□□□□ -1.01
SMC5-202ENST00000471372 ST14Q9Y5Y6 855 aa8.77□□□□□ -1.01
SMC5-202ENST00000471372 WDR64B1ANS9 1081 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 TRAF5O00463 557 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 AURKAO14965 403 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 ABLIM3O94929 683 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 FBXO21O94952 628 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 APPP05067 770 aa8.76□□□□□ -1.01
SMC5-202ENST00000471372 KRT18P05783 430 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms