RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 USP14P54578 494 aa29.52■■■□□ 2.32
U2AF1-208ENST00000471250 SASS6Q6UVJ0 657 aa29.52■■■□□ 2.32
U2AF1-208ENST00000471250 VWA3AA6NCI4 1184 aa29.51■■■□□ 2.31
U2AF1-208ENST00000471250 IL17AQ16552 155 aa29.51■■■□□ 2.31
U2AF1-208ENST00000471250 USH1GQ495M9 461 aa29.51■■■□□ 2.31
U2AF1-208ENST00000471250 TMEM60Q9H2L4 133 aa29.51■■■□□ 2.31
U2AF1-208ENST00000471250 CCNT1O60563 726 aaKnown RBP29.5■■■□□ 2.31
U2AF1-208ENST00000471250 USP2O75604 605 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-208ENST00000471250 EPHX2P34913 555 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 MCTP2Q6DN12 878 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.5■■■□□ 2.31
U2AF1-208ENST00000471250 PHIPQ8WWQ0 1821 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 EMILIN3Q9NT22 766 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 ADM5C9JUS6 153 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 PRPHP41219 470 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 SPP2Q13103 211 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 MTMR2Q13614 643 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 USP49Q70CQ1 688 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 ELOA2Q8IYF1 753 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-208ENST00000471250 ZNF280CQ8ND82 737 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 ZC3H15Q8WU90 426 aaKnown RBP29.5■■■□□ 2.31
U2AF1-208ENST00000471250 FBXO28Q9NVF7 368 aa29.5■■■□□ 2.31
U2AF1-208ENST00000471250 MEIS2O14770 477 aa29.49■■■□□ 2.31
U2AF1-208ENST00000471250 EDIL3O43854 480 aa29.49■■■□□ 2.31
U2AF1-208ENST00000471250 LONP1P36776 959 aaKnown RBP29.49■■■□□ 2.31
U2AF1-208ENST00000471250 KRBA2Q6ZNG9 492 aa29.49■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L15C9J2P7 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L13C9JLJ4 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L11C9JVI0 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L18D6R9N7 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L22D6RA61 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L17D6RBQ6 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L19D6RCP7 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L20D6RJB6 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 BACE1P56817 501 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L24Q0WX57 530 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 AP3B2Q13367 1082 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 LONRF3Q496Y0 759 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 USP17L6PQ6QN14 398 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 TEX2Q8IWB9 1127 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 RNF214Q8ND24 703 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 SYMPKQ92797 1274 aaKnown RBP29.48■■■□□ 2.31
U2AF1-208ENST00000471250 EPSTI1Q96J88 318 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 SCN4AP35499 1836 aa29.48■■■□□ 2.31
U2AF1-208ENST00000471250 NEMFO60524 1076 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 CCDC174Q6PII3 467 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 DTHD1Q6ZMT9 781 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 PANK2Q9BZ23 570 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 KIAA1468Q9P260 1216 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 POLR2DO15514 142 aaKnown RBP29.47■■■□□ 2.31
U2AF1-208ENST00000471250 KRT26Q7Z3Y9 468 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 PRPF38AQ8NAV1 312 aaKnown RBP29.47■■■□□ 2.31
U2AF1-208ENST00000471250 CNNM3Q8NE01 707 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 SLF1Q9BQI6 1058 aa29.47■■■□□ 2.31
U2AF1-208ENST00000471250 OPLAHO14841 1288 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 OR52Z1P0C646 297 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 VCAM1P19320 739 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 DGKZQ13574 1117 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 DLK2Q6UY11 383 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 ZHX2Q9Y6X8 837 aa29.46■■■□□ 2.31
U2AF1-208ENST00000471250 MYH7BA7E2Y1 1941 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 C19orf81C9J6K1 198 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 TAL1P17542 331 aaPredicted RBP29.45■■■□□ 2.31
U2AF1-208ENST00000471250 MAP3K9P80192 1104 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 PRKG1Q13976 671 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 PPP4R3AQ6IN85 833 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 C12orf42Q96LP6 360 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 NAP1L4Q99733 375 aaKnown RBP29.45■■■□□ 2.31
U2AF1-208ENST00000471250 ANO3Q9BYT9 981 aa29.45■■■□□ 2.31
U2AF1-208ENST00000471250 PAPPA2Q9BXP8 1791 aa29.44■■■□□ 2.3
U2AF1-208ENST00000471250 FOSP01100 380 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-208ENST00000471250 SERTAD1Q9UHV2 236 aa29.44■■■□□ 2.3
U2AF1-208ENST00000471250 ABCB11O95342 1321 aa29.44■■■□□ 2.3
U2AF1-208ENST00000471250 PIK3CDO00329 1044 aa29.44■■■□□ 2.3
U2AF1-208ENST00000471250 UVSSAQ2YD98 709 aa29.44■■■□□ 2.3
U2AF1-208ENST00000471250 ERCC4Q92889 916 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-208ENST00000471250 MRPL11Q9Y3B7 192 aaKnown RBP29.44■■■□□ 2.3
U2AF1-208ENST00000471250 SMCHD1A6NHR9 2005 aa29.43■■■□□ 2.3
U2AF1-208ENST00000471250 IQCA1LA6NCM1 817 aa29.43■■■□□ 2.3
U2AF1-208ENST00000471250 ACTN4O43707 911 aaKnown RBP29.43■■■□□ 2.3
U2AF1-208ENST00000471250 STX1AQ16623 288 aa29.43■■■□□ 2.3
U2AF1-208ENST00000471250 SAMD1Q6SPF0 538 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-208ENST00000471250 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-208ENST00000471250 TANGO6Q9C0B7 1094 aa29.43■■■□□ 2.3
U2AF1-208ENST00000471250 TAF1DQ9H5J8 278 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-208ENST00000471250 RPAP3Q9H6T3 665 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-208ENST00000471250 A0A087X0B3 334 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 PPP1R12BO60237 982 aaPredicted RBP29.42■■■□□ 2.3
U2AF1-208ENST00000471250 TDP2O95551 362 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 GCFC2P16383 781 aaKnown RBP29.42■■■□□ 2.3
U2AF1-208ENST00000471250 USP11P51784 963 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 ANO6Q4KMQ2 910 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 LDHDQ86WU2 507 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 PDILTQ8N807 584 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 MTMR9Q96QG7 549 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 P2RX7Q99572 595 aaKnown RBP29.42■■■□□ 2.3
U2AF1-208ENST00000471250 USP25Q9UHP3 1055 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 HOOK1Q9UJC3 728 aaKnown RBP29.42■■■□□ 2.3
U2AF1-208ENST00000471250 PPP1R9AQ9ULJ8 1098 aa29.42■■■□□ 2.3
U2AF1-208ENST00000471250 AFG3L2Q9Y4W6 797 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms