RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 DLL1O00548 723 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 PDHBP11177 359 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
PTPRE-207ENST00000471218 RXRAP19793 462 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 CAP2P40123 477 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-207ENST00000471218 IRX3P78415 501 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-207ENST00000471218 DNM1Q05193 864 aaKnown RBP10.51□□□□□ -0.73
PTPRE-207ENST00000471218 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 SPP2Q13103 211 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 RILPL1Q5EBL4 403 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 MYSM1Q5VVJ2 828 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 ZFPM1Q8IX07 1006 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 STK11IPQ8N1F8 1099 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 SRBD1Q8N5C6 995 aaKnown RBP10.51□□□□□ -0.73
PTPRE-207ENST00000471218 PHKBQ93100 1093 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 SPATA32Q96LK8 384 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 PHF20Q9BVI0 1012 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 RCOR1Q9UKL0 485 aa10.51□□□□□ -0.73
PTPRE-207ENST00000471218 SIPA1L1O43166 1804 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 PLA2G6O60733 806 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 PRPF40AO75400 957 aaKnown RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 LETM1O95202 739 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 MAPK4P31152 587 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 ICA1Q05084 483 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 ORC2Q13416 577 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 PKN1Q16512 942 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 LRIT3Q3SXY7 679 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 GPRC5AQ8NFJ5 357 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 RRP36Q96EU6 259 aaKnown RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 RIOX1Q9H6W3 641 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 BARHL2Q9NY43 387 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 SEC63Q9UGP8 760 aaKnown RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 CEP131Q9UPN4 1083 aa10.5□□□□□ -0.73
PTPRE-207ENST00000471218 V9GY48 417 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-207ENST00000471218 A0A1W2PQ27 194 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 A0A1W2PQ64 194 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 A0A1W2PQD8 194 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 PLEKHA8P1O95397 391 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 KRT2P35908 639 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 GNL2Q13823 731 aaKnown RBP10.49□□□□□ -0.73
PTPRE-207ENST00000471218 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 DIS3L2Q8IYB7 885 aaKnown RBP10.49□□□□□ -0.73
PTPRE-207ENST00000471218 MTMR8Q96EF0 704 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 GDF15Q99988 308 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 ASCC2Q9H1I8 757 aaPredicted RBP10.49□□□□□ -0.73
PTPRE-207ENST00000471218 C11orf49Q9H6J7 331 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
PTPRE-207ENST00000471218 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 PNMA2Q9UL42 364 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 OGDHLQ9ULD0 1010 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 MGAMO43451 1857 aa10.49□□□□□ -0.73
PTPRE-207ENST00000471218 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
PTPRE-207ENST00000471218 FIBPO43427 364 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 PPP6R2O75170 966 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 GNA11P29992 359 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 HMGCS2P54868 508 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 BACE1P56817 501 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 CCNA1P78396 465 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 BTNL9Q6UXG8 535 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 RAB11FIP4Q86YS3 637 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 LPAR1Q92633 364 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 DDX19AQ9NUU7 478 aaKnown RBP10.48□□□□□ -0.73
PTPRE-207ENST00000471218 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 NOL7Q9UMY1 257 aaKnown RBP10.48□□□□□ -0.73
PTPRE-207ENST00000471218 CNPY2Q9Y2B0 182 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 TMX2Q9Y320 296 aa10.48□□□□□ -0.73
PTPRE-207ENST00000471218 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 MSCO60682 206 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 GH2P01242 217 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 EEF2P13639 858 aaKnown RBP10.47□□□□□ -0.73
PTPRE-207ENST00000471218 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 RGS2P41220 211 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 ZNF445P59923 1031 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 SLC39A14Q15043 492 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 TREML2Q5T2D2 321 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-207ENST00000471218 ANO1Q5XXA6 986 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 C7orf61Q8IZ16 206 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 LINC00301Q8NCQ3 95 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-207ENST00000471218 MAF1Q9H063 256 aa10.47□□□□□ -0.73
PTPRE-207ENST00000471218 ZMYND12Q9H0C1 365 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms