RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 PDILTQ8N807 584 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 BAP1Q92560 729 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 FANCLQ9NW38 375 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TRMT1Q9NXH9 659 aaKnown RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 MAP10Q9P2G4 905 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 USP21Q9UK80 565 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 NFE2L3Q9Y4A8 694 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TACC3Q9Y6A5 838 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 ROBO3Q96MS0 1386 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TAF1P21675 1872 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 LAD1O00515 517 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 SLU7O95391 586 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 PLEKHA8P1O95397 391 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 ATP2C1P98194 919 aaPredicted RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 PKN1Q16512 942 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 SPECC1Q5M775 1068 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 MEX3CQ5U5Q3 659 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 SPECC1LQ69YQ0 1117 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 ARMCX5Q6P1M9 558 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 C15orf52Q6ZUT6 534 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 TBC1D22AQ8WUA7 517 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 SRRTQ9BXP5 876 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
SMC4-212ENST00000470240 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 PHLPP2Q6ZVD8 1323 aa9.05□□□□□ -0.96
SMC4-212ENST00000470240 THSD7AQ9UPZ6 1657 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 CYP2D7A0A087X1C5 515 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 VWA3AA6NCI4 1184 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 MYL1P05976 194 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 ATP1A3P13637 1013 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 PRDX5P30044 214 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
SMC4-212ENST00000470240 SH3BP2P78314 561 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 TFAP4Q01664 338 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 TRIM14Q14142 442 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 GRM4Q14833 912 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 ZNF174Q15697 407 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 FAM47AQ5JRC9 791 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 SOGA3Q5TF21 947 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 SPATA1Q5VX52 437 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 PIK3AP1Q6ZUJ8 805 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 BLIDQ8IZY5 108 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 PNMA1Q8ND90 353 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 MNS1Q8NEH6 495 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 UBE2Q2Q8WVN8 375 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 ANKRD7Q92527 254 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 PPP1R13BQ96KQ4 1090 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
SMC4-212ENST00000470240 FEZ1Q99689 392 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 BAG1Q99933 345 aaPredicted RBP9.04□□□□□ -0.96
SMC4-212ENST00000470240 NAA15Q9BXJ9 866 aaKnown RBP9.04□□□□□ -0.96
SMC4-212ENST00000470240 MAGEF1Q9HAY2 307 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 TCP11L1Q9NUJ3 509 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 SEC63Q9UGP8 760 aaKnown RBP9.04□□□□□ -0.96
SMC4-212ENST00000470240 LY75O60449 1722 aa9.04□□□□□ -0.96
SMC4-212ENST00000470240 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 UBE2Q2LH0YL09 131 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 hCG_1984214I3L0E3 225 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 LCE2BO14633 110 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 STX10O60499 249 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 PPP1R2P41236 205 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 STAT6P42226 847 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 AFMP43652 599 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 FNBP4Q8N3X1 1017 aaPredicted RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 ZNF713Q8N859 430 aaPredicted RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 DAGLBQ8NCG7 672 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 CCDC51Q96ER9 411 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 TMX4Q9H1E5 349 aaPredicted RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 CUEDC2Q9H467 287 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 ARGLU1Q9NWB6 273 aaPredicted RBP9.03□□□□□ -0.96
SMC4-212ENST00000470240 GGA1Q9UJY5 639 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 PCDHA4Q9UN74 947 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.03□□□□□ -0.963e-11■■■□□ 18.8
SMC4-212ENST00000470240 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
SMC4-212ENST00000470240 COL4A1P02462 1669 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 TNRC6CQ9HCJ0 1690 aaKnown RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 AKR1B15C9JRZ8 316 aaPredicted RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 BBOX1O75936 387 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 UFL1O94874 794 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
SMC4-212ENST00000470240 KLRK1P26718 216 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 GNA11P29992 359 aa9.02□□□□□ -0.97
SMC4-212ENST00000470240 MCM7P33993 719 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms