RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 CNTN2Q02246 1040 aa20.77■□□□□ 0.92
LMNA-211ENST00000470199 TOB2Q14106 344 aaPredicted RBP20.77■□□□□ 0.92
LMNA-211ENST00000470199 IFFO2Q5TF58 517 aa20.77■□□□□ 0.92
LMNA-211ENST00000470199 FANCBQ8NB91 859 aa20.77■□□□□ 0.92
LMNA-211ENST00000470199 TM6SF1Q9BZW5 370 aa20.77■□□□□ 0.92
LMNA-211ENST00000470199 FBXO40Q9UH90 709 aa20.77■□□□□ 0.92
LMNA-211ENST00000470199 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
LMNA-211ENST00000470199 PRKAR2AP13861 404 aaKnown RBP20.76■□□□□ 0.91
LMNA-211ENST00000470199 UBXN2AP68543 259 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 NSMFQ6X4W1 530 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 CCDC82Q8N4S0 544 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 AGXT2Q9BYV1 514 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 FAM217BQ9NTX9 383 aaPredicted RBP20.76■□□□□ 0.91
LMNA-211ENST00000470199 NAP1L2Q9ULW6 460 aaPredicted RBP20.76■□□□□ 0.91
LMNA-211ENST00000470199 CYP46A1Q9Y6A2 500 aa20.76■□□□□ 0.91
LMNA-211ENST00000470199 ZNFX1Q9P2E3 1918 aaKnown RBP20.75■□□□□ 0.91
LMNA-211ENST00000470199 hCG_1642624A0A1W2PR95 340 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 ZBTB43O43298 467 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 CALM1P0DP23 149 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 CALM2P0DP24 149 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 CALM3P0DP25 149 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 CCND3P30281 292 aaPredicted RBP20.75■□□□□ 0.91
LMNA-211ENST00000470199 KIF5BP33176 963 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 PRAMEF19Q5SWL8 479 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 FBXO11Q86XK2 927 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
LMNA-211ENST00000470199 TRPV1Q8NER1 839 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 RNF208Q9H0X6 261 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 CYP39A1Q9NYL5 469 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 ASTN1O14525 1302 aa20.75■□□□□ 0.91
LMNA-211ENST00000470199 SOWAHBA6NEL2 793 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 ZBTB5O15062 677 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 EN2P19622 333 aaPredicted RBP20.74■□□□□ 0.91
LMNA-211ENST00000470199 CDC27P30260 824 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
LMNA-211ENST00000470199 OLFML2BQ68BL8 750 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 SLC30A10Q6XR72 485 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 SYNE3Q6ZMZ3 975 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 TMTC3Q6ZXV5 915 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 FBXL16Q8N461 479 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 FAM133AQ8N9E0 248 aa20.74■□□□□ 0.91
LMNA-211ENST00000470199 GOLGA8AA7E2F4 631 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 GOLGA8BA8MQT2 603 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 POTEB2H3BUK9 544 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 ANAPC15P60006 121 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 MFSD14CQ5VZR4 134 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 SPZ1Q9BXG8 430 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 SLC5A4Q9NY91 659 aa20.73■□□□□ 0.91
LMNA-211ENST00000470199 DIS3Q9Y2L1 958 aaKnown RBP20.73■□□□□ 0.91
LMNA-211ENST00000470199 OPLAHO14841 1288 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 ADD1P35611 737 aaKnown RBP20.72■□□□□ 0.91
LMNA-211ENST00000470199 FUT2Q10981 343 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 RTN1Q16799 776 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 TINF2Q9BSI4 451 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 TMEM106CQ9BVX2 250 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 AMNQ9BXJ7 453 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.72■□□□□ 0.91
LMNA-211ENST00000470199 PAK6Q9NQU5 681 aaPredicted RBP20.72■□□□□ 0.91
LMNA-211ENST00000470199 ABCB11O95342 1321 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 RPTORQ8N122 1335 aa20.72■□□□□ 0.91
LMNA-211ENST00000470199 PNMA6FA0A0J9YX94 578 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 PTPDC1A2A3K4 754 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 CALML3P27482 149 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 GNAQP50148 359 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 SHISA4Q96DD7 197 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 DEFB118Q96PH6 123 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 LZTS2Q9BRK4 669 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 HMX1Q9NP08 348 aaPredicted RBP20.71■□□□□ 0.91
LMNA-211ENST00000470199 PCDHA1Q9Y5I3 950 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 PLXNA1Q9UIW2 1896 aa20.71■□□□□ 0.91
LMNA-211ENST00000470199 BAZ2BQ9UIF8 2168 aaKnown RBP20.7■□□□□ 0.91
LMNA-211ENST00000470199 BRCA2P51587 3418 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 SNAI1O95863 264 aaPredicted RBP20.7■□□□□ 0.9
LMNA-211ENST00000470199 GJB1P08034 283 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 CYBAP13498 195 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 SMARCA1P28370 1054 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 PDIA3P30101 505 aaKnown RBP20.7■□□□□ 0.9
LMNA-211ENST00000470199 RPS6P62753 249 aaKnown RBP20.7■□□□□ 0.9
LMNA-211ENST00000470199 RNF207Q6ZRF8 634 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 RRP36Q96EU6 259 aaKnown RBP20.7■□□□□ 0.9
LMNA-211ENST00000470199 COL20A1Q9P218 1284 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 PNMA2Q9UL42 364 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 PFASO15067 1338 aa20.7■□□□□ 0.9
LMNA-211ENST00000470199 LCTP09848 1927 aa20.69■□□□□ 0.9
LMNA-211ENST00000470199 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
LMNA-211ENST00000470199 PPFIA3O75145 1194 aa20.69■□□□□ 0.9
LMNA-211ENST00000470199 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
LMNA-211ENST00000470199 EVCP57679 992 aa20.69■□□□□ 0.9
LMNA-211ENST00000470199 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
LMNA-211ENST00000470199 MAMDC4Q6UXC1 1216 aa20.69■□□□□ 0.9
LMNA-211ENST00000470199 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
LMNA-211ENST00000470199 RBM28Q9NW13 759 aaKnown RBP20.69■□□□□ 0.9
LMNA-211ENST00000470199 MRPL11Q9Y3B7 192 aaKnown RBP20.69■□□□□ 0.9
LMNA-211ENST00000470199 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
LMNA-211ENST00000470199 CNGA1P29973 690 aa20.68■□□□□ 0.9
LMNA-211ENST00000470199 ANO1Q5XXA6 986 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms