RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 IL9P15248 144 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 SMPD1P17405 629 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 KCNA5P22460 613 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 PTGS1P23219 599 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
LSM2-209ENST00000470083 OAZ1P54368 228 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 CNTN2Q02246 1040 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 POTEBQ6S5H4 581 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 FAM133AQ8N9E0 248 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
LSM2-209ENST00000470083 CTDP1Q9Y5B0 961 aaPredicted RBP14.44□□□□□ -0.1
LSM2-209ENST00000470083 CACNA1AO00555 2505 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 ASB14A6NK59 587 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 BAIAP3O94812 1187 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 NDUFB10O96000 172 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 PTCRAQ6ISU1 281 aaPredicted RBP14.43□□□□□ -0.1
LSM2-209ENST00000470083 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
LSM2-209ENST00000470083 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.43□□□□□ -0.1
LSM2-209ENST00000470083 CYP2D7A0A087X1C5 515 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 LCHNA4D1U4 455 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 GRXCR2A6NFK2 248 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 F5H6K3 240 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 PRKAB2O43741 272 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 TRIM27P14373 513 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 KLRC3Q07444 240 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 PUS10Q3MIT2 529 aaKnown RBP14.42□□□□□ -0.1
LSM2-209ENST00000470083 IQSEC1Q6DN90 963 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 FTOQ9C0B1 505 aaKnown RBP eCLIP14.42□□□□□ -0.1
LSM2-209ENST00000470083 ARMT1Q9H993 441 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 SUGCTQ9HAC7 445 aa14.42□□□□□ -0.1
LSM2-209ENST00000470083 SOWAHBA6NEL2 793 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 USP17L12C9JPN9 530 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 USP17L21D6R901 530 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 BCAR3O75815 825 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 IQCF3P0C7M6 154 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 KCNJ6P48051 423 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
LSM2-209ENST00000470083 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 A1CFQ9NQ94 594 aaKnown RBP14.41□□□□□ -0.1
LSM2-209ENST00000470083 PDGFCQ9NRA1 345 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 HOMER2Q9NSB8 354 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 NYAP2Q9P242 653 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 ZNF318Q5VUA4 2279 aa14.41□□□□□ -0.1
LSM2-209ENST00000470083 MCM3APO60318 1980 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 TRIOO75962 3097 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
LSM2-209ENST00000470083 ST18O60284 1047 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 ERVK-21P61565 698 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 HFE2Q6ZVN8 426 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 FBXO16Q8IX29 292 aaPredicted RBP14.4□□□□□ -0.1
LSM2-209ENST00000470083 RETREG2Q8NC44 543 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 MFSD14AQ96MC6 490 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 POLR3EQ9NVU0 708 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 FEM1BQ9UK73 627 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
LSM2-209ENST00000470083 COL4A4P53420 1690 aaPredicted RBP14.39□□□□□ -0.11
LSM2-209ENST00000470083 ZDBF2Q9HCK1 2354 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 MBD4O95243 580 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 WDR5P61964 334 aaKnown RBP14.39□□□□□ -0.11
LSM2-209ENST00000470083 PURAQ00577 322 aaKnown RBP14.39□□□□□ -0.11
LSM2-209ENST00000470083 BFSP2Q13515 415 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 TMEM63BQ5T3F8 832 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 AACSQ86V21 672 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 NEK9Q8TD19 979 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
LSM2-209ENST00000470083 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
LSM2-209ENST00000470083 FDX1P10109 184 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 ZP2Q05996 745 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 DUSP28Q4G0W2 176 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 NFRKBQ6P4R8 1299 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 EEPD1Q7L9B9 569 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 RAD9AQ99638 391 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 MTG1Q9BT17 334 aaPredicted RBP14.38□□□□□ -0.11
LSM2-209ENST00000470083 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 TNNQ9UQP3 1299 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
LSM2-209ENST00000470083 ZBED9Q6R2W3 1325 aa14.38□□□□□ -0.11
LSM2-209ENST00000470083 GOLIM4O00461 696 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 GJB5O95377 273 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 CPT1AP50416 773 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 FOXK2Q01167 660 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
LSM2-209ENST00000470083 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 FAM47CQ5HY64 1035 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
LSM2-209ENST00000470083 ANKS1AQ92625 1134 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 CLUAP1Q96AJ1 413 aa14.37□□□□□ -0.11
LSM2-209ENST00000470083 FAM50BQ9Y247 325 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms