RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 COPS5Q92905 334 aa6.01□□□□□ -1.45
VPS8-220ENST00000469713 FEZ1Q99689 392 aa6.01□□□□□ -1.45
VPS8-220ENST00000469713 CDADC1Q9BWV3 514 aa6.01□□□□□ -1.45
VPS8-220ENST00000469713 NCOA5Q9HCD5 579 aaKnown RBP6.01□□□□□ -1.45
VPS8-220ENST00000469713 RAPGEF3O95398 923 aa6□□□□□ -1.45
VPS8-220ENST00000469713 CPP00450 1065 aa6□□□□□ -1.45
VPS8-220ENST00000469713 C6orf222P0C671 652 aaPredicted RBP6□□□□□ -1.45
VPS8-220ENST00000469713 CD8BP10966 210 aa6□□□□□ -1.45
VPS8-220ENST00000469713 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
VPS8-220ENST00000469713 SEPHS1P49903 392 aa6□□□□□ -1.45
VPS8-220ENST00000469713 RCSD1Q6JBY9 416 aa6□□□□□ -1.45
VPS8-220ENST00000469713 USP53Q70EK8 1073 aa6□□□□□ -1.45
VPS8-220ENST00000469713 SPRED2Q7Z698 418 aa6□□□□□ -1.45
VPS8-220ENST00000469713 SYNPOQ8N3V7 929 aa6□□□□□ -1.45
VPS8-220ENST00000469713 NPLOC4Q8TAT6 608 aa6□□□□□ -1.45
VPS8-220ENST00000469713 FRS2Q8WU20 508 aa6□□□□□ -1.45
VPS8-220ENST00000469713 CARS2Q9HA77 564 aaKnown RBP6□□□□□ -1.45
VPS8-220ENST00000469713 CLEC1BQ9P126 229 aa6□□□□□ -1.45
VPS8-220ENST00000469713 DNAJC25-GNG10A0A024R161 153 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 FGF10O15520 208 aaPredicted RBP5.99□□□□□ -1.45
VPS8-220ENST00000469713 PRNPP04156 253 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 PLS3P13797 630 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 CD97P48960 835 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 GYS2P54840 703 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 WAPLQ7Z5K2 1190 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 KSR1Q8IVT5 923 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 PPIL6Q8IXY8 311 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 STK11IPQ8N1F8 1099 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 TMEFF2Q9UIK5 374 aaPredicted RBP5.99□□□□□ -1.45
VPS8-220ENST00000469713 SLC5A6Q9Y289 635 aa5.99□□□□□ -1.45
VPS8-220ENST00000469713 ANKRD62A6NC57 917 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 ARNTLO00327 626 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 PLD2O14939 933 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 SPINK2P20155 84 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 PABPC4Q13310 644 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS8-220ENST00000469713 DALRD3Q5D0E6 543 aaKnown RBP5.98□□□□□ -1.45
VPS8-220ENST00000469713 ANGEL2Q5VTE6 544 aaKnown RBP5.98□□□□□ -1.45
VPS8-220ENST00000469713 EEF1DP3Q658K8 133 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 DTX1Q86Y01 620 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 PTCHD1Q96NR3 888 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 CLUHP3Q96NS8 147 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
VPS8-220ENST00000469713 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
VPS8-220ENST00000469713 ERVK13-1Q9NX77 482 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 CCDC39Q9UFE4 941 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 NDOR1Q9UHB4 597 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 ZNF281Q9Y2X9 895 aa5.98□□□□□ -1.45
VPS8-220ENST00000469713 KIAA1324LA8MWY0 1029 aaPredicted RBP5.97□□□□□ -1.45
VPS8-220ENST00000469713 MEFVO15553 781 aaPredicted RBP5.97□□□□□ -1.45
VPS8-220ENST00000469713 ENDOUP21128 410 aaKnown RBP5.97□□□□□ -1.45
VPS8-220ENST00000469713 ZP2Q05996 745 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 FNDC3BQ53EP0 1204 aaKnown RBP5.97□□□□□ -1.45
VPS8-220ENST00000469713 ACBD5Q5T8D3 534 aaPredicted RBP5.97□□□□□ -1.45
VPS8-220ENST00000469713 KCNT2Q6UVM3 1135 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 NFXL1Q6ZNB6 911 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 CCDC103Q8IW40 242 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 NAT16Q8N8M0 369 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 TMEM52Q8NDY8 209 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 FLCNQ8NFG4 579 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 SLC7A14Q8TBB6 771 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 SLC52A2Q9HAB3 445 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 LMCD1Q9NZU5 365 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 SLAMF8Q9P0V8 285 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 TRAF6Q9Y4K3 522 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 ASXL2Q76L83 1435 aa5.97□□□□□ -1.45
VPS8-220ENST00000469713 RFPL3O75679 317 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 PAMP19021 973 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 CEBPAP49715 358 aaPredicted RBP5.96□□□□□ -1.46
VPS8-220ENST00000469713 GABREP78334 506 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 TRIM61Q5EBN2 209 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 RALGPS1Q5JS13 557 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 ARTNQ5T4W7 220 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 MBLAC2Q68D91 279 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 CPNE8Q86YQ8 564 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 DHX37Q8IY37 1157 aaKnown RBP5.96□□□□□ -1.46
VPS8-220ENST00000469713 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 PTPRN2Q92932 1015 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 NINJ1Q92982 152 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 FCRL2Q96LA5 508 aaPredicted RBP5.96□□□□□ -1.46
VPS8-220ENST00000469713 G6PC3Q9BUM1 346 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 PHF20Q9BVI0 1012 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 PRDM7Q9NQW5 492 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 EBF1Q9UH73 591 aa5.96□□□□□ -1.46
VPS8-220ENST00000469713 NPHP3-ACAD11A0A0J9YXS1 232 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 IRS4O14654 1257 aaPredicted RBP5.95□□□□□ -1.46
VPS8-220ENST00000469713 LCP1P13796 627 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 SDSP20132 328 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 KCNAB2Q13303 367 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 LAPTM5Q13571 262 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 TESK1Q15569 626 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 INF2Q27J81 1249 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
VPS8-220ENST00000469713 STYK1Q6J9G0 422 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 CYP2R1Q6VVX0 501 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 BRAPQ7Z569 592 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 NIM1KQ8IY84 436 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 GSTCDQ8NEC7 633 aa5.95□□□□□ -1.46
VPS8-220ENST00000469713 DIO2Q92813 273 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms