RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 ATL3Q6DD88 541 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 TADA3O75528 432 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 SHMT1P34896 483 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 MAP3K10Q02779 954 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 TEX35Q5T0J7 233 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 STAG1Q8WVM7 1258 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 SWAP70Q9UH65 585 aa11.27□□□□□ -0.6
SEMA4D-215ENST00000469653 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 UBXN4Q92575 508 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 UBXN6Q9BZV1 441 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 E7EWF7 191 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 CARD6Q9BX69 1037 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF341Q9BYN7 854 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 ATAD5Q96QE3 1844 aa11.27□□□□□ -0.61
SEMA4D-215ENST00000469653 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 FANCCQ00597 558 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 TRDNQ13061 729 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 TMCO3Q6UWJ1 677 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 MNS1Q8NEH6 495 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 FGRP09769 529 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 CERKLQ49MI3 558 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 ANGEL1Q9UNK9 670 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 PHF20L1A8MW92 1017 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 NLRP12P59046 1061 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 RRP1BQ14684 758 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
SEMA4D-215ENST00000469653 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 CAPN15O75808 1086 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF202O95125 648 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 GDF11O95390 407 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 SLC20A2Q08357 652 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 FSTL1Q12841 308 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 CST9Q5W186 159 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF444Q8N0Y2 327 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 SMARCE1Q969G3 411 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 GDAP1L1Q96MZ0 367 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 FAM170AA1A519 330 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 RASA1P20936 1047 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 KARSQ15046 597 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 FAM47AQ5JRC9 791 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 NKX2-3Q8TAU0 364 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 B4E1Z4 1266 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ORC4O43929 436 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 INPP5BP32019 993 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 IREB2P48200 963 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 STK38Q15208 465 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 GBA2Q9HCG7 927 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 ZNF112Q9UJU3 913 aa11.25□□□□□ -0.61
SEMA4D-215ENST00000469653 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 KLHL10Q6JEL2 608 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 MICU3Q86XE3 530 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 KRT23Q9C075 422 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 FEZ2Q9UHY8 353 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 SERPINC1P01008 464 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 TUBB4AP04350 444 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 AKR1B1P15121 316 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 EVCP57679 992 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 C2orf69Q8N8R5 385 aa11.24□□□□□ -0.61
SEMA4D-215ENST00000469653 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
SEMA4D-215ENST00000469653 EFCAB8A8MWE9 144 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms