RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
SRRT-208ENST00000469602 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 OGDHLQ9ULD0 1010 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 SYNGAP1Q96PV0 1343 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 NFIBO00712 420 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
SRRT-208ENST00000469602 DDAH1O94760 285 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 QRICH1Q2TAL8 776 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 USH1GQ495M9 461 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 PRAMEF19Q5SWL8 479 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 NSMFQ6X4W1 530 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 NFXL1Q6ZNB6 911 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
SRRT-208ENST00000469602 ZNF654Q8IZM8 581 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 CLEC4DQ8WXI8 215 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
SRRT-208ENST00000469602 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 CCDC69A6NI79 296 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 SEPT4O43236 478 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
SRRT-208ENST00000469602 KIF5BP33176 963 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
SRRT-208ENST00000469602 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
SRRT-208ENST00000469602 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
SRRT-208ENST00000469602 NUP133Q8WUM0 1156 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 MTMR8Q96EF0 704 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 ASTN1O14525 1302 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 ABCB11O95342 1321 aa11.32□□□□□ -0.6
SRRT-208ENST00000469602 ALPK3Q96L96 1907 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 ASB14A6NK59 587 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 ZBTB5O15062 677 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 CALM1P0DP23 149 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 CALM2P0DP24 149 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 CALM3P0DP25 149 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 SLC35G1Q2M3R5 365 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 ARMCX2Q7L311 632 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 NECAB2Q7Z6G3 386 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 ABHD16BQ9H3Z7 469 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
SRRT-208ENST00000469602 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
SRRT-208ENST00000469602 CYTH3O43739 400 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 AKR1A1P14550 325 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 CALML3P27482 149 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 RPS6P62753 249 aaKnown RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 MAF1Q9H063 256 aa11.3□□□□□ -0.6
SRRT-208ENST00000469602 ADD3Q9UEY8 706 aaKnown RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 ZHX1Q9UKY1 873 aaPredicted RBP11.3□□□□□ -0.6
SRRT-208ENST00000469602 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
SRRT-208ENST00000469602 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 PNMA6FA0A0J9YX94 578 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 RARBP10826 455 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 CPA1P15085 419 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 RXRAP19793 462 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 GNAQP50148 359 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 TRAF1Q13077 416 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
SRRT-208ENST00000469602 ANO1Q5XXA6 986 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 BLOC1S2Q6QNY1 142 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 MICU3Q86XE3 530 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 MCF2L2Q86YR7 1114 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 PIGSQ96S52 555 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 HTATIP2Q9BUP3 242 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
SRRT-208ENST00000469602 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms