RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 GPN3Q9UHW5 284 aaPredicted RBP8.39□□□□□ -1.07
TMC1-203ENST00000469455 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
TMC1-203ENST00000469455 HDAC5Q9UQL6 1122 aa8.39□□□□□ -1.07
TMC1-203ENST00000469455 DLEC1Q9Y238 1755 aa8.39□□□□□ -1.07
TMC1-203ENST00000469455 COL11A2P13942 1736 aaPredicted RBP8.39□□□□□ -1.07
TMC1-203ENST00000469455 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 PTPRAP18433 802 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 GARTP22102 1010 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 TM4SF1P30408 202 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 ADH7P40394 386 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 MRE11P49959 708 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 ANAPC15P60006 121 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 CAMK2GQ13555 558 aaPredicted RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 RABL6Q3YEC7 729 aaPredicted RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 ELMSAN1Q6PJG2 1045 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 NLGN1Q8N2Q7 840 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 NYXQ9GZU5 481 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 ADAM19Q9H013 955 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 BICC1Q9H694 974 aaKnown RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
TMC1-203ENST00000469455 SAMM50Q9Y512 469 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
TMC1-203ENST00000469455 POLRMTO00411 1230 aaKnown RBP8.37□□□□□ -1.07
TMC1-203ENST00000469455 PAGE1O75459 146 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
TMC1-203ENST00000469455 CHMLP26374 656 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 MAP2K3P46734 347 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 FOXO4P98177 505 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 DDR1Q08345 913 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 COL9A2Q14055 689 aaPredicted RBP8.37□□□□□ -1.07
TMC1-203ENST00000469455 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 FAM43AQ8N2R8 423 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 TTC9Q92623 222 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
TMC1-203ENST00000469455 KIF1BPQ96EK5 621 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 MDFIQ99750 246 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 SMG9Q9H0W8 520 aaKnown RBP8.37□□□□□ -1.07
TMC1-203ENST00000469455 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
TMC1-203ENST00000469455 RTL9Q8NET4 1388 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 SURF6O75683 361 aaKnown RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 B3GALT4O96024 378 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 CSF1RP07333 972 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 TFE3P19532 575 aaPredicted RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 ZNF157P51786 506 aaPredicted RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 PCDH1Q08174 1060 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 GAS6Q14393 721 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 SNAP47Q5SQN1 464 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 NBPF5PQ86XG9 351 aaPredicted RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 GOLM1Q8NBJ4 401 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 PDGFDQ9GZP0 370 aaPredicted RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 NAGPAQ9UK23 515 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 COL4A1P02462 1669 aa8.36□□□□□ -1.07
TMC1-203ENST00000469455 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
TMC1-203ENST00000469455 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 SRGAP3O43295 1099 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 PDE8AO60658 829 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 SERPINB2P05120 415 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
TMC1-203ENST00000469455 HSP90B1P14625 803 aaKnown RBP8.35□□□□□ -1.07
TMC1-203ENST00000469455 NME2P22392 152 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 CTSWP56202 376 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 Q6ZNB5 142 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
TMC1-203ENST00000469455 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 RILPL2Q969X0 211 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
TMC1-203ENST00000469455 CYP8B1Q9UNU6 501 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 SRCAPQ6ZRS2 3230 aa8.35□□□□□ -1.07
TMC1-203ENST00000469455 ARAP2Q8WZ64 1704 aa8.34□□□□□ -1.07
TMC1-203ENST00000469455 TTC41PQ6P2S7 1318 aa8.34□□□□□ -1.07
TMC1-203ENST00000469455 ELOA3CA0A087WX78 387 aaPredicted RBP8.34□□□□□ -1.07
TMC1-203ENST00000469455 ELOA3DA6NLF2 546 aaPredicted RBP8.34□□□□□ -1.07
TMC1-203ENST00000469455 SSBP05455 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMC1-203ENST00000469455 MMP10P09238 476 aa8.34□□□□□ -1.07
TMC1-203ENST00000469455 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
TMC1-203ENST00000469455 LMNB1P20700 586 aa8.34□□□□□ -1.07
TMC1-203ENST00000469455 BMP6P22004 513 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms