RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 SLC35G1Q2M3R5 365 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 MCF2L2Q86YR7 1114 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 CCDC83Q8IWF9 413 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 CD99L2Q8TCZ2 262 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 CCDC12Q8WUD4 166 aaPredicted RBP26.5■■□□□ 1.83
SREBF1-208ENST00000469356 TMX3Q96JJ7 454 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 PORCNQ9H237 461 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 CEP350Q5VT06 3117 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 PEX10O60683 326 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 GPR142Q7Z601 462 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 ABRAQ8N0Z2 381 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 PHKBQ93100 1093 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 HOMER2Q9NSB8 354 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 SLC5A4Q9NY91 659 aa26.49■■□□□ 1.83
SREBF1-208ENST00000469356 STK36Q9NRP7 1315 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 LBX1P52954 281 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 PRMT2P55345 433 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 HMGN5P82970 282 aaKnown RBP26.48■■□□□ 1.83
SREBF1-208ENST00000469356 PFKFB3Q16875 520 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-208ENST00000469356 SAMD3Q8N6K7 520 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 MMP19Q99542 508 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 KIF3AQ9Y496 699 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 RIPK3Q9Y572 518 aa26.48■■□□□ 1.83
SREBF1-208ENST00000469356 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-208ENST00000469356 SLC15A5A6NIM6 579 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 CD2BP2O95400 341 aaKnown RBP26.47■■□□□ 1.83
SREBF1-208ENST00000469356 SCG2P13521 617 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 XBP1P17861 261 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.47■■□□□ 1.83
SREBF1-208ENST00000469356 HEATR3Q7Z4Q2 680 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 ANKRD35Q8N283 1001 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 RGS22Q8NE09 1264 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 SOCS4Q8WXH5 440 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 DDX11Q96FC9 970 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 NUDT12Q9BQG2 462 aa26.47■■□□□ 1.83
SREBF1-208ENST00000469356 PFASO15067 1338 aa26.46■■□□□ 1.83
SREBF1-208ENST00000469356 K7ELQ4 463 aaPredicted RBP26.46■■□□□ 1.83
SREBF1-208ENST00000469356 PTPREP23469 700 aa26.46■■□□□ 1.83
SREBF1-208ENST00000469356 PPP1R18Q6NYC8 613 aa26.46■■□□□ 1.83
SREBF1-208ENST00000469356 FAM177A1Q8N128 213 aaPredicted RBP26.46■■□□□ 1.83
SREBF1-208ENST00000469356 GLT8D2Q9H1C3 349 aa26.46■■□□□ 1.83
SREBF1-208ENST00000469356 MAP3K20Q9NYL2 800 aaKnown RBP26.46■■□□□ 1.83
SREBF1-208ENST00000469356 CASP8AP2Q9UKL3 1982 aa26.46■■□□□ 1.83
SREBF1-208ENST00000469356 hCG_1642624A0A1W2PR95 340 aa26.45■■□□□ 1.83
SREBF1-208ENST00000469356 TEX2Q8IWB9 1127 aa26.45■■□□□ 1.83
SREBF1-208ENST00000469356 NSUN7Q8NE18 718 aaKnown RBP26.45■■□□□ 1.83
SREBF1-208ENST00000469356 CCDC148Q8NFR7 591 aa26.45■■□□□ 1.83
SREBF1-208ENST00000469356 TRIM47Q96LD4 638 aa26.45■■□□□ 1.83
SREBF1-208ENST00000469356 ORC3Q9UBD5 711 aaPredicted RBP26.45■■□□□ 1.83
SREBF1-208ENST00000469356 SMCHD1A6NHR9 2005 aa26.45■■□□□ 1.82
SREBF1-208ENST00000469356 ZNFX1Q9P2E3 1918 aaKnown RBP26.44■■□□□ 1.82
SREBF1-208ENST00000469356 NAPAP54920 295 aa26.44■■□□□ 1.82
SREBF1-208ENST00000469356 CUL5Q93034 780 aa26.44■■□□□ 1.82
SREBF1-208ENST00000469356 PRDM10Q9NQV6 1147 aa26.44■■□□□ 1.82
SREBF1-208ENST00000469356 BARHL2Q9NY43 387 aa26.44■■□□□ 1.82
SREBF1-208ENST00000469356 DOCK3Q8IZD9 2030 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 PTPDC1A2A3K4 754 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 PPP1R11O60927 126 aaPredicted RBP26.43■■□□□ 1.82
SREBF1-208ENST00000469356 ECM2O94769 699 aaPredicted RBP26.43■■□□□ 1.82
SREBF1-208ENST00000469356 BECN1Q14457 450 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 NSMFQ6X4W1 530 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 DPP9Q86TI2 863 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 FAM184AQ8NB25 1140 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 SH3GLB2Q9NR46 395 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 PLXNB2O15031 1838 aa26.43■■□□□ 1.82
SREBF1-208ENST00000469356 CTDNEP1O95476 244 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 RGS2P41220 211 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 GRB14Q14449 540 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 MUM1L1Q5H9M0 696 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 WWC2Q6AWC2 1192 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 RNF207Q6ZRF8 634 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 TRIM17Q9Y577 477 aa26.42■■□□□ 1.82
SREBF1-208ENST00000469356 MRPL12P52815 198 aaKnown RBP26.41■■□□□ 1.82
SREBF1-208ENST00000469356 MAP2K5Q13163 448 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 PKN1Q16512 942 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 SMARCC2Q8TAQ2 1214 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 CLEC4DQ8WXI8 215 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 GPKOWQ92917 476 aaPredicted RBP eCLIP26.41■■□□□ 1.824e-7■□□□□ 8.7
SREBF1-208ENST00000469356 ARHGAP39Q9C0H5 1083 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 SRRDQ9UH36 339 aa26.41■■□□□ 1.82
SREBF1-208ENST00000469356 GCOM1H8Y6P7 765 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-208ENST00000469356 POLR2MP0CAP2 368 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 ADORA2AP29274 412 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 GNA11P29992 359 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 CUL4AQ13619 759 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 PSTPIP2Q9H939 334 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 C6orf50Q9HD87 102 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 A1CFQ9NQ94 594 aaKnown RBP26.4■■□□□ 1.82
SREBF1-208ENST00000469356 SMC3Q9UQE7 1217 aa26.4■■□□□ 1.82
SREBF1-208ENST00000469356 POTEB2H3BUK9 544 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 STXBP3O00186 592 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 NFIBO00712 420 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 PPFIA3O75145 1194 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 CFBP00751 764 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 HSP90AA1P07900 732 aaKnown RBP26.39■■□□□ 1.82
SREBF1-208ENST00000469356 TRIM29Q14134 588 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 MORN1Q5T089 497 aa26.39■■□□□ 1.82
SREBF1-208ENST00000469356 CTU1Q7Z7A3 348 aaKnown RBP26.39■■□□□ 1.82
SREBF1-208ENST00000469356 TRMT44Q8IYL2 757 aaKnown RBP26.39■■□□□ 1.82
SREBF1-208ENST00000469356 BICD2Q8TD16 824 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms