RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 FBXO11Q86XK2 927 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 TINF2Q9BSI4 451 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 RIOX1Q9H6W3 641 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 A1CFQ9NQ94 594 aaKnown RBP17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 ABCB11O95342 1321 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 ZBTB5O15062 677 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 MSCO60682 206 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 CYP2C19P33261 490 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 U2AF1L4Q8WU68 220 aaKnown RBP17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
TMEM39A-205ENST00000468676 BRCA2P51587 3418 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 RPS6KB1P23443 525 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 RCAN1P53805 252 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 USH1GQ495M9 461 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 FAM133AQ8N9E0 248 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 CLEC4DQ8WXI8 215 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 CRISPLD2Q9H0B8 497 aa17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
TMEM39A-205ENST00000468676 LOC102724159A0A0B4J2E5 919 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 TFRCP02786 760 aaKnown RBP17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 CYBAP13498 195 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 ANAPC15P60006 121 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 PWP2Q15269 919 aaKnown RBP17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
TMEM39A-205ENST00000468676 ASB14A6NK59 587 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 NFIBO00712 420 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 ZBTB43O43298 467 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 CCND3P30281 292 aaPredicted RBP17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
TMEM39A-205ENST00000468676 PTPDC1A2A3K4 754 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 SEPT4O43236 478 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 CYTH3O43739 400 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 CNGA1P29973 690 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 CNTN2Q02246 1040 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 Q6ZUG5 572 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 ANKLE1Q8NAG6 615 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 PIGSQ96S52 555 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 MPHOSPH6Q99547 160 aaKnown RBP17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 AGXT2Q9BYV1 514 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
TMEM39A-205ENST00000468676 KLF18A0A0U1RQI7 1052 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 B4DLN1 442 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 CPA1P15085 419 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 MRPL12P52815 198 aaKnown RBP17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 RTN1Q16799 776 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 BRF1Q92994 677 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 FGD4Q96M96 766 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 ABHD16BQ9H3Z7 469 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 MAP3K20Q9NYL2 800 aaKnown RBP17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 OGDHLQ9ULD0 1010 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
TMEM39A-205ENST00000468676 MCM3APO60318 1980 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 SOWAHBA6NEL2 793 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 RXRAP19793 462 aa17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
TMEM39A-205ENST00000468676 LHX8Q68G74 356 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms