RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PDCP20941 246 aa13□□□□□ -0.33
MSH5-214ENST00000468602 MAPK4P31152 587 aa13□□□□□ -0.33
MSH5-214ENST00000468602 DDIT3P35638 169 aa13□□□□□ -0.33
MSH5-214ENST00000468602 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
MSH5-214ENST00000468602 Q3C1V9 767 aa13□□□□□ -0.33
MSH5-214ENST00000468602 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
MSH5-214ENST00000468602 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
MSH5-214ENST00000468602 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
MSH5-214ENST00000468602 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
MSH5-214ENST00000468602 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
MSH5-214ENST00000468602 PCDHA1Q9Y5I3 950 aa13□□□□□ -0.33
MSH5-214ENST00000468602 M0R2N6 131 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 OPLAHO14841 1288 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 XBP1P17861 261 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
MSH5-214ENST00000468602 NPY5RQ15761 445 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 FBXO18Q8NFZ0 1043 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 ABHD8Q96I13 439 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 CCPG1Q9ULG6 757 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
MSH5-214ENST00000468602 GNRH1P01148 92 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 CALML3P27482 149 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 GJB2P29033 226 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 GNA11P29992 359 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 HSD17B4P51659 736 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
MSH5-214ENST00000468602 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 ACAD9Q9H845 621 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
MSH5-214ENST00000468602 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
MSH5-214ENST00000468602 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
MSH5-214ENST00000468602 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
MSH5-214ENST00000468602 PFASO15067 1338 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 FRMPD4Q14CM0 1322 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 MEIS2O14770 477 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 FOXN1O15353 648 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 IGHA2P01877 340 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 HOXC6P09630 235 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 ERCC3P19447 782 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 BICD2Q8TD16 824 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 USP6NLQ92738 828 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
MSH5-214ENST00000468602 DIS3Q9Y2L1 958 aaKnown RBP12.97□□□□□ -0.33
MSH5-214ENST00000468602 CTDP1Q9Y5B0 961 aaPredicted RBP12.97□□□□□ -0.33
MSH5-214ENST00000468602 MGAMO43451 1857 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
MSH5-214ENST00000468602 MMP1P03956 469 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■□□□□ 8.1
MSH5-214ENST00000468602 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
MSH5-214ENST00000468602 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 IRF5Q13568 498 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 GRB14Q14449 540 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 CPXCR1Q8N123 301 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 COA7Q96BR5 231 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 C6orf50Q9HD87 102 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 RNF146Q9NTX7 359 aa12.96□□□□□ -0.33
MSH5-214ENST00000468602 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
MSH5-214ENST00000468602 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 DOCK3Q8IZD9 2030 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 GPR25O00155 361 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 TRPA1O75762 1119 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 PTPREP23469 700 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 NAPAP54920 295 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 SP3Q02447 781 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 GRM1Q13255 1194 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 MORN1Q5T089 497 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 KRT40Q6A162 431 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 HEATR3Q7Z4Q2 680 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 FAM133AQ8N9E0 248 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 DNERQ8NFT8 737 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 MORC4Q8TE76 937 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
MSH5-214ENST00000468602 CUL5Q93034 780 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 TNFRSF25Q93038 417 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 IPO9Q96P70 1041 aaKnown RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 PAGR1Q9BTK6 254 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 PORCNQ9H237 461 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms