RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 TNRC18O15417 2968 aaPredicted RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
COMMD3-206ENST00000468179 GOLGA8HP0CJ92 632 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 SEC23AQ15436 765 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 MUM1L1Q5H9M0 696 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 C7orf61Q8IZ16 206 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
COMMD3-206ENST00000468179 B4DLN1 442 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
COMMD3-206ENST00000468179 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
COMMD3-206ENST00000468179 TRAF1Q13077 416 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 WTAPQ15007 396 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 LRRC41Q15345 812 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 ADGRF4Q8IZF3 695 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 LSG1Q9H089 658 aaKnown RBP17.04■□□□□ 0.32
COMMD3-206ENST00000468179 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
COMMD3-206ENST00000468179 ZNFX1Q9P2E3 1918 aaKnown RBP17.04■□□□□ 0.32
COMMD3-206ENST00000468179 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
COMMD3-206ENST00000468179 CDC45O75419 566 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 CDC37Q16543 378 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-206ENST00000468179 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 CATIPQ7Z7H3 387 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 FGD4Q96M96 766 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 TSEN34Q9BSV6 310 aaKnown RBP17.03■□□□□ 0.32
COMMD3-206ENST00000468179 ABCB11O95342 1321 aa17.03■□□□□ 0.32
COMMD3-206ENST00000468179 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
COMMD3-206ENST00000468179 KLRF2D3W0D1 207 aa17.02■□□□□ 0.32
COMMD3-206ENST00000468179 BAATQ14032 418 aaPredicted RBP17.02■□□□□ 0.32
COMMD3-206ENST00000468179 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
COMMD3-206ENST00000468179 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
COMMD3-206ENST00000468179 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
COMMD3-206ENST00000468179 NFIBO00712 420 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 SLC27A2O14975 620 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 PGK1P00558 417 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 MCM5P33992 734 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
COMMD3-206ENST00000468179 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 CLEC4DQ8WXI8 215 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 TMEM87BQ96K49 555 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 PHF24Q9UPV7 400 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
COMMD3-206ENST00000468179 BRCA2P51587 3418 aa17.01■□□□□ 0.31
COMMD3-206ENST00000468179 MOXD2PA6NHM9 499 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
COMMD3-206ENST00000468179 CALML3P27482 149 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 ADCYAP1R1P41586 468 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
COMMD3-206ENST00000468179 TNFAIP2Q03169 654 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 NECTIN1Q15223 517 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 USH1GQ495M9 461 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 IQSEC1Q6DN90 963 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 SLC39A5Q6ZMH5 540 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 STOX1Q6ZVD7 989 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
COMMD3-206ENST00000468179 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
COMMD3-206ENST00000468179 MORC4Q8TE76 937 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 AMNQ9BXJ7 453 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 JMJD4Q9H9V9 463 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 VTA1Q9NP79 307 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
COMMD3-206ENST00000468179 PALM3A6NDB9 673 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-206ENST00000468179 ADAMTS4O75173 837 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 ALDH5A1P51649 535 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-206ENST00000468179 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
COMMD3-206ENST00000468179 GRM4Q14833 912 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 QRICH1Q2TAL8 776 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 IGDCC4Q8TDY8 1250 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 MAP3K14Q99558 947 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 CPVLQ9H3G5 476 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 MAD2L2Q9UI95 211 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 ZMYND8Q9ULU4 1186 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-206ENST00000468179 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
COMMD3-206ENST00000468179 A0A1W2PPC1 479 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 ZBTB5O15062 677 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 PRC1O43663 620 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-206ENST00000468179 CST5P28325 142 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-206ENST00000468179 KIF5BP33176 963 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 GJA9P57773 515 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms