RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CCDC96Q2M329 555 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 HELLSQ9NRZ9 838 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 SPTBN5Q9NRC6 3674 aaKnown RBP20.4■□□□□ 0.86
TRIM56-203ENST00000467847 ORC4O43929 436 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 LCTP09848 1927 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 CYP39A1Q9NYL5 469 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 CCPG1Q9ULG6 757 aa20.4■□□□□ 0.86
TRIM56-203ENST00000467847 ASTN1O14525 1302 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 TMEM265A0A087WTH1 108 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 COL9A1P20849 921 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 PDE1AP54750 535 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 NKX3-2P78367 333 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 PPIGQ13427 754 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 ALX1Q15699 326 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 TLK2Q86UE8 772 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 FAM126BQ8IXS8 530 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
TRIM56-203ENST00000467847 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.85
TRIM56-203ENST00000467847 ICAM1P05362 532 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 NOVP48745 357 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 TJAP1Q5JTD0 557 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
TRIM56-203ENST00000467847 CXCL17Q6UXB2 119 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 NSMFQ6X4W1 530 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 TMEM199Q8N511 208 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 FAM227BQ96M60 508 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 PPP1R12CQ9BZL4 782 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 AP5M1Q9H0R1 490 aa20.38■□□□□ 0.85
TRIM56-203ENST00000467847 GNEQ9Y223 722 aaKnown RBP20.38■□□□□ 0.85
TRIM56-203ENST00000467847 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 FGAP02671 866 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 FGRP09769 529 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 CSF2RAP15509 400 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 SMPD1P17405 629 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 DNAJB2P25686 324 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 SLC16A2P36021 539 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 HDAC1Q13547 482 aaPredicted RBP20.37■□□□□ 0.85
TRIM56-203ENST00000467847 FSCN1Q16658 493 aaKnown RBP20.37■□□□□ 0.85
TRIM56-203ENST00000467847 MCMDC2Q4G0Z9 681 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 EEPD1Q7L9B9 569 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 FBXO16Q8IX29 292 aaPredicted RBP20.37■□□□□ 0.85
TRIM56-203ENST00000467847 RANBP17Q9H2T7 1088 aaKnown RBP20.37■□□□□ 0.85
TRIM56-203ENST00000467847 PDGFCQ9NRA1 345 aa20.37■□□□□ 0.85
TRIM56-203ENST00000467847 TNFRSF10AO00220 468 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 DYNC1LI2O43237 492 aaPredicted RBP20.36■□□□□ 0.85
TRIM56-203ENST00000467847 ZEB2O60315 1214 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 CABYRO75952 493 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 TOP1P11387 765 aaKnown RBP20.36■□□□□ 0.85
TRIM56-203ENST00000467847 PTGS1P23219 599 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 SYDE2Q5VT97 1194 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 IQSEC1Q6DN90 963 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 C16orf59Q7L2K0 433 aa20.36■□□□□ 0.85
TRIM56-203ENST00000467847 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
TRIM56-203ENST00000467847 CD4P01730 458 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 TMEM240Q5SV17 173 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 TAPT1Q6NXT6 567 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 PURBQ96QR8 312 aaKnown RBP20.35■□□□□ 0.85
TRIM56-203ENST00000467847 TMEM47Q9BQJ4 181 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 VTA1Q9NP79 307 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
TRIM56-203ENST00000467847 TTC28Q96AY4 2481 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 ZMYM6O95789 1325 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 HSPD1P10809 573 aaKnown RBP20.34■□□□□ 0.85
TRIM56-203ENST00000467847 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
TRIM56-203ENST00000467847 ITGA7Q13683 1181 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
TRIM56-203ENST00000467847 TICAM2Q86XR7 235 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 SLC43A3Q8NBI5 491 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 TIFAQ96CG3 184 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 TCP11L1Q9NUJ3 509 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
TRIM56-203ENST00000467847 Q9Y3F1 56 aa20.34■□□□□ 0.85
TRIM56-203ENST00000467847 TRIM6-TRIM34B2RNG4 842 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 ACRP10323 421 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 CYP2C18P33260 490 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 HAND2P61296 217 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 BAATQ14032 418 aaPredicted RBP20.33■□□□□ 0.85
TRIM56-203ENST00000467847 GRIN2CQ14957 1233 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 ZNF365Q70YC5 407 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 ZNF589Q86UQ0 364 aaPredicted RBP20.33■□□□□ 0.85
TRIM56-203ENST00000467847 MORC4Q8TE76 937 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 HIPK3Q9H422 1215 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 ZNF576Q9H609 170 aa20.33■□□□□ 0.85
TRIM56-203ENST00000467847 MYO9BQ13459 2157 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 CCDC171Q6TFL3 1326 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 PTPDC1A2A3K4 754 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 NFIBO00712 420 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 PDHBP11177 359 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms