RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
RERE-209ENST00000467350 ZNF536O15090 1300 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 PQBP1O60828 265 aaKnown RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 CABYRO75952 493 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 NEFLP07196 543 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 GJA9P57773 515 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 HAND2P61296 217 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 CNTN2Q02246 1040 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 GPATCH4Q5T3I0 446 aaKnown RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
RERE-209ENST00000467350 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 Q9Y3F1 56 aa12.17□□□□□ -0.46
RERE-209ENST00000467350 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
RERE-209ENST00000467350 ASGR1P07306 291 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 ZNF589Q86UQ0 364 aaPredicted RBP12.16□□□□□ -0.46
RERE-209ENST00000467350 SLC17A8Q8NDX2 589 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
RERE-209ENST00000467350 KRT23Q9C075 422 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 MAF1Q9H063 256 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
RERE-209ENST00000467350 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
RERE-209ENST00000467350 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 PDLIM7Q9NR12 457 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
RERE-209ENST00000467350 A0A0U1RQG5 324 aaPredicted RBP12.15□□□□□ -0.46
RERE-209ENST00000467350 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 PDHBP11177 359 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 SLC16A2P36021 539 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 SNAP25P60880 206 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 NKX3-2P78367 333 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 CCSAPQ6IQ19 270 aaPredicted RBP12.15□□□□□ -0.46
RERE-209ENST00000467350 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 DSCC1Q9BVC3 393 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 CEP290O15078 2479 aa12.15□□□□□ -0.46
RERE-209ENST00000467350 FRMPD2Q68DX3 1309 aaPredicted RBP12.14□□□□□ -0.47
RERE-209ENST00000467350 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 ARVCFO00192 962 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
RERE-209ENST00000467350 TIMP1P01033 207 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 FPGSQ05932 587 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
RERE-209ENST00000467350 SHHQ15465 462 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
RERE-209ENST00000467350 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
RERE-209ENST00000467350 CCDC136Q96JN2 1154 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 FGD4Q96M96 766 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
RERE-209ENST00000467350 KDM4AO75164 1064 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 SNHG28P0DPA3 235 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 CDK7P50613 346 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 SMAD3P84022 425 aaKnown RBP12.13□□□□□ -0.47
RERE-209ENST00000467350 TRDNQ13061 729 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 FSCN1Q16658 493 aaKnown RBP12.13□□□□□ -0.47
RERE-209ENST00000467350 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 TLK2Q86UE8 772 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 SKAP1Q86WV1 359 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 ANKS1AQ92625 1134 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 ZSCAN10Q96SZ4 725 aaPredicted RBP12.13□□□□□ -0.47
RERE-209ENST00000467350 UBAC1Q9BSL1 405 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RERE-209ENST00000467350 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
RERE-209ENST00000467350 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
RERE-209ENST00000467350 CALML3P27482 149 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 PDE4DQ08499 809 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 PPIGQ13427 754 aaKnown RBP eCLIP12.12□□□□□ -0.47
RERE-209ENST00000467350 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
RERE-209ENST00000467350 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms