RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 RAB30Q15771 203 aa22.88■■□□□ 1.25
FAM53A-204ENST00000467215 AKNAD1Q5T1N1 836 aa22.88■■□□□ 1.25
FAM53A-204ENST00000467215 SLC43A3Q8NBI5 491 aa22.88■■□□□ 1.25
FAM53A-204ENST00000467215 NEDD1Q8NHV4 660 aa22.88■■□□□ 1.25
FAM53A-204ENST00000467215 HERVK_113Q902F9 699 aa22.88■■□□□ 1.25
FAM53A-204ENST00000467215 CHMP4BQ9H444 224 aaKnown RBP22.88■■□□□ 1.25
FAM53A-204ENST00000467215 COL4A4P53420 1690 aaPredicted RBP22.87■■□□□ 1.25
FAM53A-204ENST00000467215 FBXO16Q8IX29 292 aaPredicted RBP22.87■■□□□ 1.25
FAM53A-204ENST00000467215 IFNL3Q8IZI9 196 aa22.87■■□□□ 1.25
FAM53A-204ENST00000467215 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
FAM53A-204ENST00000467215 SEC62Q99442 399 aaKnown RBP22.87■■□□□ 1.25
FAM53A-204ENST00000467215 WNT8AQ9H1J5 351 aa22.87■■□□□ 1.25
FAM53A-204ENST00000467215 PTPRSQ13332 1948 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 GRIN2DO15399 1336 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 ZFYP08048 801 aaPredicted RBP22.86■■□□□ 1.25
FAM53A-204ENST00000467215 ALAS1P13196 640 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 CCL23P55773 120 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 ITGA7Q13683 1181 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 CCDC85BQ15834 202 aaPredicted RBP22.86■■□□□ 1.25
FAM53A-204ENST00000467215 FSCN1Q16658 493 aaKnown RBP22.86■■□□□ 1.25
FAM53A-204ENST00000467215 OTOP2Q7RTS6 562 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 MTIF3Q9H2K0 278 aaKnown RBP22.86■■□□□ 1.25
FAM53A-204ENST00000467215 PDGFCQ9NRA1 345 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 MSRAQ9UJ68 235 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 SCN10AQ9Y5Y9 1956 aa22.86■■□□□ 1.25
FAM53A-204ENST00000467215 B4GALT4O60513 344 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 FDX1P10109 184 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 SMPD1P17405 629 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 IGFBP4P22692 258 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 SLC1A4P43007 532 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 SNAP25P60880 206 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 PSMC6P62333 389 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 MUM1L1Q5H9M0 696 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 TMEM63BQ5T3F8 832 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 KCTD1Q719H9 257 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 EEPD1Q7L9B9 569 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 FAM160B2Q86V87 743 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 ATXN2LQ8WWM7 1075 aaKnown RBP22.85■■□□□ 1.25
FAM53A-204ENST00000467215 GMCL1Q96IK5 515 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 TRERF1Q96PN7 1200 aa22.85■■□□□ 1.25
FAM53A-204ENST00000467215 NOC4LQ9BVI4 516 aaKnown RBP22.85■■□□□ 1.25
FAM53A-204ENST00000467215 ASB14A6NK59 587 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 FGBP02675 491 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 COL9A1P20849 921 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 TFAP4Q01664 338 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 PDE4BQ07343 736 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 PPARAQ07869 468 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 ADAMTS19Q8TE59 1207 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 ASB2Q96Q27 587 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 NAPBQ9H115 298 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 TRPV6Q9H1D0 765 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 REV3LO60673 3130 aa22.84■■□□□ 1.25
FAM53A-204ENST00000467215 CABYRO75952 493 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 MCCP23508 829 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 RABGGTBP53611 331 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 STAG1Q8WVM7 1258 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 AP5M1Q9H0R1 490 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 SLC28A3Q9HAS3 691 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 CYP39A1Q9NYL5 469 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 RCAN3Q9UKA8 241 aa22.83■■□□□ 1.25
FAM53A-204ENST00000467215 PATL2C9JE40 543 aaKnown RBP22.82■■□□□ 1.24
FAM53A-204ENST00000467215 DYNC1LI2O43237 492 aaPredicted RBP22.82■■□□□ 1.24
FAM53A-204ENST00000467215 TKFCQ3LXA3 575 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 TAPT1Q6NXT6 567 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 CHURC1Q8WUH1 139 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 SCLYQ96I15 445 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 PURBQ96QR8 312 aaKnown RBP22.82■■□□□ 1.24
FAM53A-204ENST00000467215 NACAP1Q9BZK3 213 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 RAPGEFL1Q9UHV5 662 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 STX8Q9UNK0 236 aa22.82■■□□□ 1.24
FAM53A-204ENST00000467215 PRRC2BQ5JSZ5 2229 aaKnown RBP22.81■■□□□ 1.24
FAM53A-204ENST00000467215 NMT2O60551 498 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 MYOGP15173 224 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 PPP2R2DQ66LE6 453 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 NSMFQ6X4W1 530 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 VWCEQ96DN2 955 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 PRR12Q9ULL5 1215 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 MTMR7Q9Y216 660 aa22.81■■□□□ 1.24
FAM53A-204ENST00000467215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
FAM53A-204ENST00000467215 FOXP2O15409 715 aa22.8■■□□□ 1.24
FAM53A-204ENST00000467215 MICALL1Q8N3F8 863 aa22.8■■□□□ 1.24
FAM53A-204ENST00000467215 TET1Q8NFU7 2136 aa22.8■■□□□ 1.24
FAM53A-204ENST00000467215 UHRF1Q96T88 793 aaPredicted RBP22.8■■□□□ 1.24
FAM53A-204ENST00000467215 CCPG1Q9ULG6 757 aa22.8■■□□□ 1.24
FAM53A-204ENST00000467215 TSPY2A6NKD2 308 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 ZBBXA8MT70 800 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 ZEB2O60315 1214 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 SLC3A2P08195 630 aaKnown RBP22.79■■□□□ 1.24
FAM53A-204ENST00000467215 MRPS5P82675 430 aaKnown RBP22.79■■□□□ 1.24
FAM53A-204ENST00000467215 CTDSPL2Q05D32 466 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 PI4K2BQ8TCG2 481 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 FSD1Q9BTV5 496 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 DCTPP1Q9H773 170 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 VTA1Q9NP79 307 aa22.79■■□□□ 1.24
FAM53A-204ENST00000467215 PLA2G6O60733 806 aa22.78■■□□□ 1.24
FAM53A-204ENST00000467215 CCDC96Q2M329 555 aa22.78■■□□□ 1.24
FAM53A-204ENST00000467215 LRRFIP1Q32MZ4 808 aaKnown RBP22.78■■□□□ 1.24
FAM53A-204ENST00000467215 ZMYM1Q5SVZ6 1142 aa22.78■■□□□ 1.24
FAM53A-204ENST00000467215 OTUD7AQ8TE49 926 aaPredicted RBP22.78■■□□□ 1.24
FAM53A-204ENST00000467215 ALDH8A1Q9H2A2 487 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms