RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TTF2Q9UNY4 1162 aaKnown RBP20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.14■□□□□ 0.82
SNAPC3-205ENST00000467062 GRIN2DO15399 1336 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 TIAM2Q8IVF5 1701 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 SMTNP53814 917 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 YTHDF3Q7Z739 585 aaKnown RBP20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 SLC24A3Q9HC58 644 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 CCNL1Q9UK58 526 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 MYO6Q9UM54 1294 aa20.14■□□□□ 0.81
SNAPC3-205ENST00000467062 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 USP17L3A6NCW0 530 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 USP17L4A6NCW7 530 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 TFAP4Q01664 338 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 PLCB4Q15147 1175 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 USP17L1Q7RTZ2 530 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 ZNF579Q8NAF0 562 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 PAGE5Q96GU1 130 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 SAMM50Q9Y512 469 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 CNTNAP5Q8WYK1 1306 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 TARSL2A2RTX5 802 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 NDUFAB1O14561 156 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 IRF6O14896 467 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 FGRP09769 529 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 RCAN1P53805 252 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 TTC38Q5R3I4 469 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 CEP85LQ5SZL2 805 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 RCSD1Q6JBY9 416 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 CPVLQ9H3G5 476 aa20.13■□□□□ 0.81
SNAPC3-205ENST00000467062 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 TEX33O43247 280 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 NT5DC1Q5TFE4 455 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 SH3RF3Q8TEJ3 882 aaPredicted RBP20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 GOLGA8KD6RF30 607 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 SSR1P43307 286 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 CDR1P51861 262 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 IL17AQ16552 155 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 RAD9BQ6WBX8 426 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 CPLX3Q8WVH0 158 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 SAP30BPQ9UHR5 308 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-205ENST00000467062 AGPSO00116 658 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 CCDC50Q8IVM0 306 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 MLKLQ8NB16 471 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 AHDC1Q5TGY3 1603 aaPredicted RBP20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 ZNF18P17022 549 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 SH3GL2Q99962 352 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 EHD4Q9H223 541 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 MAPK8IP1Q9UQF2 711 aa20.11■□□□□ 0.81
SNAPC3-205ENST00000467062 SCG2P13521 617 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 CLNS1AP54105 237 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 PPP2R5BQ15173 497 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 PPFIBP1Q86W92 1011 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 GOLGA8HP0CJ92 632 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 EZRP15311 586 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 CCDC40Q4G0X9 1142 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 ENOX1Q8TC92 643 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 TGFBRAP1Q8WUH2 860 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 RABEP2Q9H5N1 569 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 ATP8A2Q9NTI2 1148 aa20.1■□□□□ 0.81
SNAPC3-205ENST00000467062 DUOX1Q9NRD9 1551 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 TFRCP02786 760 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 PLCD1P51178 756 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 DPYDQ12882 1025 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 TTC19Q6DKK2 380 aaPredicted RBP20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 TYW1BQ6NUM6 668 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 ANKRD2Q9GZV1 360 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 VCPKMTQ9H867 229 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 RTN2O75298 545 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 DDAH1O94760 285 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 CALM1P0DP23 149 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 CALM2P0DP24 149 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 CALM3P0DP25 149 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 SPATA20Q8TB22 786 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 PLIN2Q99541 437 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 PAGR1Q9BTK6 254 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
SNAPC3-205ENST00000467062 ORC4O43929 436 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 OPA1O60313 960 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 RASSF9O75901 435 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 SKOR1P84550 965 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 GRIK3Q13003 919 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 RPGRIP1Q96KN7 1286 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 SELENOOQ9BVL4 669 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 MKNK2Q9HBH9 465 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 STX8Q9UNK0 236 aa20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 COL22A1Q8NFW1 1626 aaPredicted RBP20.08■□□□□ 0.81
SNAPC3-205ENST00000467062 RFC4P35249 363 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 AMPD2Q01433 879 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 ACTN3Q08043 901 aaPredicted RBP20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 NCAPH2Q6IBW4 605 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 ARMC2Q8NEN0 867 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 MAGEC3Q8TD91 643 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 MTRQ99707 1265 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms