RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 STAG1Q8WVM7 1258 aa10.65□□□□□ -0.7
PTPDC1-203ENST00000467049 NOC4LQ9BVI4 516 aaKnown RBP10.65□□□□□ -0.7
PTPDC1-203ENST00000467049 AP5M1Q9H0R1 490 aa10.65□□□□□ -0.7
PTPDC1-203ENST00000467049 NKX2-4Q9H2Z4 354 aa10.65□□□□□ -0.7
PTPDC1-203ENST00000467049 HIPK3Q9H422 1215 aa10.65□□□□□ -0.7
PTPDC1-203ENST00000467049 ZNF536O15090 1300 aa10.65□□□□□ -0.71
PTPDC1-203ENST00000467049 TTC28Q96AY4 2481 aa10.65□□□□□ -0.71
PTPDC1-203ENST00000467049 SCN10AQ9Y5Y9 1956 aa10.65□□□□□ -0.71
PTPDC1-203ENST00000467049 LAMA2P24043 3122 aaKnown RBP10.65□□□□□ -0.71
PTPDC1-203ENST00000467049 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 TMEM232C9JQI7 657 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 M0R2C6 588 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 PRDM1O75626 825 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 SLC3A2P08195 630 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 PDE4BQ07343 736 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 CXCL17Q6UXB2 119 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 MIER1Q8N108 512 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 GRIN2DO15399 1336 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 TCF20Q9UGU0 1960 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 COL9A1P20849 921 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 NOL8Q76FK4 1167 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 RPUSD2Q8IZ73 545 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 ADAMTS19Q8TE59 1207 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 VTA1Q9NP79 307 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 YBX2Q9Y2T7 364 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 PCDHA11Q9Y5I1 949 aa10.64□□□□□ -0.71
PTPDC1-203ENST00000467049 LOC102724159A0A0B4J2E5 919 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 APPP05067 770 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 SMPD1P17405 629 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 SLC1A4P43007 532 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 PWP2Q15269 919 aaKnown RBP10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 TAPT1Q6NXT6 567 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 AGBL1Q96MI9 1066 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 WNT8AQ9H1J5 351 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
PTPDC1-203ENST00000467049 DYNC1LI2O43237 492 aaPredicted RBP10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 B4GALT4O60513 344 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 PFKMP08237 780 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 ALAS1P13196 640 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 TFAP4Q01664 338 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 RCSD1Q6JBY9 416 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 DCTPP1Q9H773 170 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 CYP39A1Q9NYL5 469 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 ISY1Q9ULR0 285 aaKnown RBP10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 SLC4A7Q9Y6M7 1214 aa10.62□□□□□ -0.71
PTPDC1-203ENST00000467049 IGFBP4P22692 258 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 PPARAQ07869 468 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 OTOP2Q7RTS6 562 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 FBXO16Q8IX29 292 aaPredicted RBP10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 NAPBQ9H115 298 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 TRPV6Q9H1D0 765 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 POLR3EQ9NVU0 708 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 TTC41PQ6P2S7 1318 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 MCCP23508 829 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 CCL23P55773 120 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 DUSP28Q4G0W2 176 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 MUM1L1Q5H9M0 696 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 PPP2R2DQ66LE6 453 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 VWCEQ96DN2 955 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
PTPDC1-203ENST00000467049 TRIP12Q14669 1992 aaPredicted RBP10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 ICAM1P05362 532 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 SUPT20HL2P0C7V6 817 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 POU3F3P20264 500 aaPredicted RBP10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 RFC2P35250 354 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 NOVP48745 357 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 PSMC6P62333 389 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 KCTD1Q719H9 257 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 RCAN3Q9UKA8 241 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 NCOR1O75376 2440 aa10.6□□□□□ -0.71
PTPDC1-203ENST00000467049 EYSQ5T1H1 3165 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms