RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 RASA3Q14644 834 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 ZYXQ15942 572 aaKnown RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 GNPTABQ3T906 1256 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 CC2D1BQ5T0F9 858 aaKnown RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 C6orf15Q6UXA7 325 aaPredicted RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 SEZ6L2Q6UXD5 910 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 UBE3DQ7Z6J8 389 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 BAHD1Q8TBE0 780 aaPredicted RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 PSMG3-AS1Q96PY0 264 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 MIPEPQ99797 713 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 PIF1Q9H611 641 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 SNTG2Q9NY99 539 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 LTBP3Q9NS15 1303 aa6.38□□□□□ -1.39
UBP1-207ENST00000466441 MAP2P11137 1827 aaKnown RBP6.38□□□□□ -1.39
UBP1-207ENST00000466441 C1orf167Q5SNV9 1468 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 CPSF1Q10570 1443 aaKnown RBP6.37□□□□□ -1.39
UBP1-207ENST00000466441 ACEP12821 1306 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 UBOX5O94941 541 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 GJB6O95452 261 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 POLR2BP30876 1174 aaKnown RBP6.37□□□□□ -1.39
UBP1-207ENST00000466441 KCNMA1Q12791 1236 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 KIAA1211LQ6NV74 962 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 SLC6A18Q96N87 628 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 ASPNQ9BXN1 380 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 STOML1Q9UBI4 398 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 RAXQ9Y2V3 346 aa6.37□□□□□ -1.39
UBP1-207ENST00000466441 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 ANKRD36BQ8N2N9 1353 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 SLITRK5O94991 958 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 CYP27A1Q02318 531 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 CYP27C1Q4G0S4 372 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 GIMAP6Q6P9H5 292 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 NME9Q86XW9 330 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.36□□□□□ -1.39
UBP1-207ENST00000466441 TMEM192Q8IY95 271 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 PPP1R13LQ8WUF5 828 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 TP53INP1Q96A56 240 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 FBXL18Q96ME1 805 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 LGR6Q9HBX8 967 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 C1GALT1Q9NS00 363 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 RGPD5Q99666 1765 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 PEAK1Q9H792 1746 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 KIF1AQ12756 1690 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 ALS2Q96Q42 1657 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
UBP1-207ENST00000466441 SSH2Q76I76 1423 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 ANKARQ7Z5J8 1434 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 IQCA1LA6NCM1 817 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 AGRPO00253 132 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 SMARCA5O60264 1052 aaPredicted RBP6.35□□□□□ -1.39
UBP1-207ENST00000466441 CLSTN1O94985 981 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 TCEAL1Q15170 157 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 CCDC144CPQ8IYA2 1237 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 MICAL1Q8TDZ2 1067 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 RNF141Q8WVD5 230 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 KREMEN1Q96MU8 473 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 PRKRIP1Q9H875 184 aaPredicted RBP6.35□□□□□ -1.39
UBP1-207ENST00000466441 GTF2IRD1Q9UHL9 959 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
UBP1-207ENST00000466441 RGPD2P0DJD1 1756 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 SHPRHQ149N8 1683 aa6.35□□□□□ -1.39
UBP1-207ENST00000466441 LTN1O94822 1766 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 KTN1Q86UP2 1357 aaKnown RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 ABCA3Q99758 1704 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 ANKRD34BA5PLL1 514 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 GSC2O15499 205 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 DYNC1LI2O43237 492 aaPredicted RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 KIR3DL1P43629 444 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 TNNT2P45379 298 aaPredicted RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 RASSF7Q02833 373 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 CDK5R2Q13319 367 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 NBPF12Q5TAG4 269 aaPredicted RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 HEATR6Q6AI08 1181 aaKnown RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 OGFOD3Q6PK18 319 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 CDH24Q86UP0 819 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 SLC51AQ86UW1 340 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 KLHL6Q8WZ60 621 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 TBC1D32Q96NH3 1257 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 APBA2Q99767 749 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 DUSP23Q9BVJ7 150 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
UBP1-207ENST00000466441 GBP3Q9H0R5 595 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 C19orf44Q9H6X5 657 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 KCNH3Q9ULD8 1083 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
UBP1-207ENST00000466441 USP6P35125 1406 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 POLR3AO14802 1390 aaPredicted RBP6.33□□□□□ -1.4
UBP1-207ENST00000466441 MSH6P52701 1360 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 PARD3Q8TEW0 1356 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 USP54Q70EL1 1684 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms