RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 USP17L21D6R901 530 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 SURF6O75683 361 aaKnown RBP11.09□□□□□ -0.63
ABCF3-205ENST00000466416 SMPD1P17405 629 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 PTPN5P54829 565 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 ERVK-21P61565 698 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 CNTN2Q02246 1040 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 POLA2Q14181 598 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 NEK9Q8TD19 979 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
ABCF3-205ENST00000466416 SLC38A10Q9HBR0 1119 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
ABCF3-205ENST00000466416 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
ABCF3-205ENST00000466416 CACNA1AO00555 2505 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 ZDBF2Q9HCK1 2354 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 F5H6K3 240 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 FDX1P10109 184 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 PDE6AP16499 860 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 KLRC3Q07444 240 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 BFSP2Q13515 415 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 PKN1Q16512 942 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 LRRFIP1Q32MZ4 808 aaKnown RBP11.08□□□□□ -0.64
ABCF3-205ENST00000466416 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 C16orf86Q6ZW13 317 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 SSH3Q8TE77 659 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
ABCF3-205ENST00000466416 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
ABCF3-205ENST00000466416 RAD9AQ99638 391 aa11.08□□□□□ -0.64
ABCF3-205ENST00000466416 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
ABCF3-205ENST00000466416 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 ZP2Q05996 745 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
ABCF3-205ENST00000466416 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 ADHFE1Q8IWW8 467 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 LCORLQ8N3X6 602 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
ABCF3-205ENST00000466416 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
ABCF3-205ENST00000466416 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
ABCF3-205ENST00000466416 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 MCM3APO60318 1980 aa11.07□□□□□ -0.64
ABCF3-205ENST00000466416 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 ANP32CO43423 234 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 GJB5O95377 273 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 PARNO95453 639 aaKnown RBP11.06□□□□□ -0.64
ABCF3-205ENST00000466416 CPT1AP50416 773 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 WDR5P61964 334 aaKnown RBP11.06□□□□□ -0.64
ABCF3-205ENST00000466416 PURAQ00577 322 aaKnown RBP11.06□□□□□ -0.64
ABCF3-205ENST00000466416 PTPROQ16827 1216 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 DUSP28Q4G0W2 176 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 BMP8AQ7Z5Y6 402 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
ABCF3-205ENST00000466416 VTA1Q9NP79 307 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 MTUS1Q9ULD2 1270 aa11.06□□□□□ -0.64
ABCF3-205ENST00000466416 WDFY4Q6ZS81 3184 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 LINC01553A4QN01 128 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 H3BQ06 376 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 IPO8O15397 1037 aaKnown RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 KPNA6O60684 536 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 EFCAB14O75071 495 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 NDUFB10O96000 172 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 PTPRZ1P23471 2315 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 HERC4Q5GLZ8 1057 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 FAM47CQ5HY64 1035 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 TRMT2AQ8IZ69 625 aaKnown RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 PABPC5Q96DU9 382 aaKnown RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 IRF2BPLQ9H1B7 796 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 A1CFQ9NQ94 594 aaKnown RBP11.05□□□□□ -0.64
ABCF3-205ENST00000466416 HOMER2Q9NSB8 354 aa11.05□□□□□ -0.64
ABCF3-205ENST00000466416 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
ABCF3-205ENST00000466416 ABHD14A-ACY1A0A1B0GW23 586 aa11.04□□□□□ -0.64
ABCF3-205ENST00000466416 PRKAB2O43741 272 aa11.04□□□□□ -0.64
ABCF3-205ENST00000466416 GFRA3O60609 400 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms